Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh17Q9R100 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh17Q9R100 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh17Q9R100 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh17Q9R100 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh17Q9R100 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh17Q9R100 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh17Q9R100 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh17Q9R100 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.63■□□□□ 0.25
Cdh17Q9R100 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cdh17Q9R100 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.62■□□□□ 0.25
Cdh17Q9R100 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh17Q9R100 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh17Q9R100 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh17Q9R100 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.62■□□□□ 0.25
Cdh17Q9R100 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.62■□□□□ 0.25
Cdh17Q9R100 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh17Q9R100 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh17Q9R100 Gm17661-201ENSMUST00000170317 270 ntBASIC16.62■□□□□ 0.25
Cdh17Q9R100 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.62■□□□□ 0.25
Cdh17Q9R100 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh17Q9R100 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh17Q9R100 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh17Q9R100 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh17Q9R100 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh17Q9R100 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh17Q9R100 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh17Q9R100 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh17Q9R100 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh17Q9R100 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cdh17Q9R100 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh17Q9R100 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh17Q9R100 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cdh17Q9R100 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh17Q9R100 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh17Q9R100 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh17Q9R100 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh17Q9R100 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh17Q9R100 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh17Q9R100 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cdh17Q9R100 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh17Q9R100 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh17Q9R100 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh17Q9R100 Gm15039-201ENSMUST00000118914 875 ntBASIC16.61■□□□□ 0.25
Cdh17Q9R100 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.61■□□□□ 0.25
Cdh17Q9R100 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.61■□□□□ 0.25
Cdh17Q9R100 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh17Q9R100 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh17Q9R100 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh17Q9R100 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh17Q9R100 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh17Q9R100 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh17Q9R100 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.61■□□□□ 0.25
Cdh17Q9R100 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh17Q9R100 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cdh17Q9R100 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh17Q9R100 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh17Q9R100 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cdh17Q9R100 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh17Q9R100 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh17Q9R100 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh17Q9R100 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh17Q9R100 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.6■□□□□ 0.25
Cdh17Q9R100 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh17Q9R100 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.6■□□□□ 0.25
Cdh17Q9R100 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.6■□□□□ 0.25
Cdh17Q9R100 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Cdh17Q9R100 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh17Q9R100 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh17Q9R100 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh17Q9R100 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh17Q9R100 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh17Q9R100 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh17Q9R100 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh17Q9R100 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh17Q9R100 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh17Q9R100 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh17Q9R100 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh17Q9R100 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh17Q9R100 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh17Q9R100 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh17Q9R100 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh17Q9R100 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh17Q9R100 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh17Q9R100 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh17Q9R100 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.59■□□□□ 0.25
Cdh17Q9R100 Gm5643-201ENSMUST00000117081 966 ntBASIC16.59■□□□□ 0.25
Cdh17Q9R100 Gm37025-201ENSMUST00000195159 829 ntBASIC16.59■□□□□ 0.25
Cdh17Q9R100 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cdh17Q9R100 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh17Q9R100 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.59■□□□□ 0.25
Cdh17Q9R100 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.59■□□□□ 0.25
Cdh17Q9R100 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh17Q9R100 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh17Q9R100 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Cdh17Q9R100 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cdh17Q9R100 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh17Q9R100 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh17Q9R100 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cdh17Q9R100 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms