Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp2Q9R061 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp2Q9R061 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp2Q9R061 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Nubp2Q9R061 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp2Q9R061 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.12■□□□□ 0.01
Nubp2Q9R061 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp2Q9R061 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.12■□□□□ 0.01
Nubp2Q9R061 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.12■□□□□ 0.01
Nubp2Q9R061 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Nubp2Q9R061 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp2Q9R061 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp2Q9R061 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp2Q9R061 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Nubp2Q9R061 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Nubp2Q9R061 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Nubp2Q9R061 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.12■□□□□ 0.01
Nubp2Q9R061 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp2Q9R061 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp2Q9R061 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp2Q9R061 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp2Q9R061 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp2Q9R061 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Nubp2Q9R061 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.12■□□□□ 0.01
Nubp2Q9R061 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp2Q9R061 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp2Q9R061 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp2Q9R061 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Nubp2Q9R061 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Nubp2Q9R061 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp2Q9R061 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp2Q9R061 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Nubp2Q9R061 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp2Q9R061 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp2Q9R061 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp2Q9R061 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp2Q9R061 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp2Q9R061 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.11■□□□□ 0.01
Nubp2Q9R061 Mir5122-201ENSMUST00000175004 89 ntBASIC15.11■□□□□ 0.01
Nubp2Q9R061 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.11■□□□□ 0.01
Nubp2Q9R061 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp2Q9R061 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp2Q9R061 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp2Q9R061 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp2Q9R061 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Nubp2Q9R061 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp2Q9R061 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp2Q9R061 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp2Q9R061 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp2Q9R061 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp2Q9R061 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nubp2Q9R061 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nubp2Q9R061 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nubp2Q9R061 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.1■□□□□ 0.01
Nubp2Q9R061 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nubp2Q9R061 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Nubp2Q9R061 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.1■□□□□ 0.01
Nubp2Q9R061 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Nubp2Q9R061 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nubp2Q9R061 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.1■□□□□ 0.01
Nubp2Q9R061 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.1■□□□□ 0.01
Nubp2Q9R061 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nubp2Q9R061 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Nubp2Q9R061 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Nubp2Q9R061 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.1■□□□□ 0.01
Nubp2Q9R061 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nubp2Q9R061 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nubp2Q9R061 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nubp2Q9R061 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nubp2Q9R061 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nubp2Q9R061 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nubp2Q9R061 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Nubp2Q9R061 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nubp2Q9R061 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.1■□□□□ 0.01
Nubp2Q9R061 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nubp2Q9R061 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nubp2Q9R061 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nubp2Q9R061 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nubp2Q9R061 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nubp2Q9R061 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nubp2Q9R061 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nubp2Q9R061 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Nubp2Q9R061 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nubp2Q9R061 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nubp2Q9R061 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.09■□□□□ 0.01
Nubp2Q9R061 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nubp2Q9R061 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nubp2Q9R061 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nubp2Q9R061 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.09■□□□□ 0.01
Nubp2Q9R061 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Nubp2Q9R061 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.09■□□□□ 0.01
Nubp2Q9R061 Mir2861-201ENSMUST00000175539 82 ntBASIC15.09■□□□□ 0.01
Nubp2Q9R061 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nubp2Q9R061 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Nubp2Q9R061 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Nubp2Q9R061 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Nubp2Q9R061 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.09■□□□□ 0.01
Nubp2Q9R061 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.09■□□□□ 0.01
Nubp2Q9R061 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nubp2Q9R061 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms