Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Zc3h8Q9JJ48 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Zc3h8Q9JJ48 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Zc3h8Q9JJ48 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Zc3h8Q9JJ48 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Zc3h8Q9JJ48 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zc3h8Q9JJ48 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Zc3h8Q9JJ48 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zc3h8Q9JJ48 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zc3h8Q9JJ48 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zc3h8Q9JJ48 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Zc3h8Q9JJ48 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Zc3h8Q9JJ48 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zc3h8Q9JJ48 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zc3h8Q9JJ48 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zc3h8Q9JJ48 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.82■□□□□ 0.12
Zc3h8Q9JJ48 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zc3h8Q9JJ48 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zc3h8Q9JJ48 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Zc3h8Q9JJ48 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zc3h8Q9JJ48 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Zc3h8Q9JJ48 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zc3h8Q9JJ48 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Zc3h8Q9JJ48 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Zc3h8Q9JJ48 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Zc3h8Q9JJ48 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.81■□□□□ 0.12
Zc3h8Q9JJ48 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Zc3h8Q9JJ48 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Zc3h8Q9JJ48 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Zc3h8Q9JJ48 Gm22697-201ENSMUST00000175194 63 ntBASIC15.81■□□□□ 0.12
Zc3h8Q9JJ48 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Zc3h8Q9JJ48 Mir1668-201ENSMUST00000184114 107 ntBASIC15.81■□□□□ 0.12
Zc3h8Q9JJ48 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Zc3h8Q9JJ48 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Zc3h8Q9JJ48 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Zc3h8Q9JJ48 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Zc3h8Q9JJ48 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Zc3h8Q9JJ48 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Zc3h8Q9JJ48 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Zc3h8Q9JJ48 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Zc3h8Q9JJ48 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Zc3h8Q9JJ48 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Zc3h8Q9JJ48 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Zc3h8Q9JJ48 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Zc3h8Q9JJ48 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Zc3h8Q9JJ48 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Zc3h8Q9JJ48 Gm7213-201ENSMUST00000215977 950 ntBASIC15.8■□□□□ 0.12
Zc3h8Q9JJ48 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Zc3h8Q9JJ48 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Zc3h8Q9JJ48 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Zc3h8Q9JJ48 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Zc3h8Q9JJ48 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Zc3h8Q9JJ48 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Zc3h8Q9JJ48 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.8■□□□□ 0.12
Zc3h8Q9JJ48 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Zc3h8Q9JJ48 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Zc3h8Q9JJ48 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Zc3h8Q9JJ48 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zc3h8Q9JJ48 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Zc3h8Q9JJ48 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Zc3h8Q9JJ48 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zc3h8Q9JJ48 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Zc3h8Q9JJ48 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Zc3h8Q9JJ48 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Zc3h8Q9JJ48 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Zc3h8Q9JJ48 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zc3h8Q9JJ48 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Zc3h8Q9JJ48 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.79■□□□□ 0.12
Zc3h8Q9JJ48 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zc3h8Q9JJ48 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Zc3h8Q9JJ48 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Zc3h8Q9JJ48 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Zc3h8Q9JJ48 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zc3h8Q9JJ48 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Zc3h8Q9JJ48 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Zc3h8Q9JJ48 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Zc3h8Q9JJ48 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.79■□□□□ 0.12
Zc3h8Q9JJ48 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Zc3h8Q9JJ48 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Zc3h8Q9JJ48 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.78■□□□□ 0.12
Zc3h8Q9JJ48 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Zc3h8Q9JJ48 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Zc3h8Q9JJ48 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Zc3h8Q9JJ48 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
Zc3h8Q9JJ48 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Zc3h8Q9JJ48 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Zc3h8Q9JJ48 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.78■□□□□ 0.12
Zc3h8Q9JJ48 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Zc3h8Q9JJ48 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Zc3h8Q9JJ48 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Zc3h8Q9JJ48 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.78■□□□□ 0.12
Zc3h8Q9JJ48 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Zc3h8Q9JJ48 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.78■□□□□ 0.12
Zc3h8Q9JJ48 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Zc3h8Q9JJ48 Gm27000-201ENSMUST00000182943 842 ntBASIC15.78■□□□□ 0.12
Zc3h8Q9JJ48 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.78■□□□□ 0.12
Zc3h8Q9JJ48 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Zc3h8Q9JJ48 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Zc3h8Q9JJ48 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Zc3h8Q9JJ48 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms