Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1fQ9JIS7 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.36■□□□□ 0.69
Cacna1fQ9JIS7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1fQ9JIS7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1fQ9JIS7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1fQ9JIS7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1fQ9JIS7 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1fQ9JIS7 Gm8969-201ENSMUST00000199694 526 ntBASIC19.35■□□□□ 0.69
Cacna1fQ9JIS7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1fQ9JIS7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cacna1fQ9JIS7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1fQ9JIS7 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.35■□□□□ 0.69
Cacna1fQ9JIS7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cacna1fQ9JIS7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cacna1fQ9JIS7 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1fQ9JIS7 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.35■□□□□ 0.69
Cacna1fQ9JIS7 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1fQ9JIS7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1fQ9JIS7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1fQ9JIS7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1fQ9JIS7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1fQ9JIS7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1fQ9JIS7 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1fQ9JIS7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1fQ9JIS7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.34■□□□□ 0.69
Cacna1fQ9JIS7 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1fQ9JIS7 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Cacna1fQ9JIS7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1fQ9JIS7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Cacna1fQ9JIS7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1fQ9JIS7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1fQ9JIS7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1fQ9JIS7 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cacna1fQ9JIS7 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cacna1fQ9JIS7 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cacna1fQ9JIS7 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cacna1fQ9JIS7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Cacna1fQ9JIS7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.33■□□□□ 0.69
Cacna1fQ9JIS7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna1fQ9JIS7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Cacna1fQ9JIS7 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna1fQ9JIS7 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.33■□□□□ 0.68
Cacna1fQ9JIS7 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna1fQ9JIS7 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Cacna1fQ9JIS7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna1fQ9JIS7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna1fQ9JIS7 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna1fQ9JIS7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna1fQ9JIS7 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna1fQ9JIS7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna1fQ9JIS7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna1fQ9JIS7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna1fQ9JIS7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1fQ9JIS7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1fQ9JIS7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1fQ9JIS7 Gm6443-201ENSMUST00000203599 874 ntBASIC19.32■□□□□ 0.68
Cacna1fQ9JIS7 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.32■□□□□ 0.68
Cacna1fQ9JIS7 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1fQ9JIS7 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1fQ9JIS7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1fQ9JIS7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Cacna1fQ9JIS7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cacna1fQ9JIS7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1fQ9JIS7 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1fQ9JIS7 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1fQ9JIS7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.32■□□□□ 0.68
Cacna1fQ9JIS7 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.32■□□□□ 0.68
Cacna1fQ9JIS7 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.32■□□□□ 0.68
Cacna1fQ9JIS7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.32■□□□□ 0.68
Cacna1fQ9JIS7 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1fQ9JIS7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cacna1fQ9JIS7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.31■□□□□ 0.68
Cacna1fQ9JIS7 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1fQ9JIS7 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1fQ9JIS7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1fQ9JIS7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1fQ9JIS7 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Cacna1fQ9JIS7 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1fQ9JIS7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1fQ9JIS7 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.31■□□□□ 0.68
Cacna1fQ9JIS7 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.31■□□□□ 0.68
Cacna1fQ9JIS7 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1fQ9JIS7 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1fQ9JIS7 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1fQ9JIS7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1fQ9JIS7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1fQ9JIS7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1fQ9JIS7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1fQ9JIS7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1fQ9JIS7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cacna1fQ9JIS7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.3■□□□□ 0.68
Cacna1fQ9JIS7 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1fQ9JIS7 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1fQ9JIS7 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1fQ9JIS7 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1fQ9JIS7 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cacna1fQ9JIS7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1fQ9JIS7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1fQ9JIS7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1fQ9JIS7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms