Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vps35Q9EQH3 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.07■□□□□ 0.32
Vps35Q9EQH3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps35Q9EQH3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps35Q9EQH3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps35Q9EQH3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vps35Q9EQH3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vps35Q9EQH3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Vps35Q9EQH3 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps35Q9EQH3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Vps35Q9EQH3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vps35Q9EQH3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps35Q9EQH3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.07■□□□□ 0.32
Vps35Q9EQH3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.07■□□□□ 0.32
Vps35Q9EQH3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps35Q9EQH3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.07■□□□□ 0.32
Vps35Q9EQH3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Vps35Q9EQH3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Vps35Q9EQH3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vps35Q9EQH3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps35Q9EQH3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps35Q9EQH3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps35Q9EQH3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vps35Q9EQH3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps35Q9EQH3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vps35Q9EQH3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Vps35Q9EQH3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.06■□□□□ 0.32
Vps35Q9EQH3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Vps35Q9EQH3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Vps35Q9EQH3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps35Q9EQH3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vps35Q9EQH3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vps35Q9EQH3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Vps35Q9EQH3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.06■□□□□ 0.32
Vps35Q9EQH3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vps35Q9EQH3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps35Q9EQH3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Vps35Q9EQH3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Vps35Q9EQH3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.06■□□□□ 0.32
Vps35Q9EQH3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.06■□□□□ 0.32
Vps35Q9EQH3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vps35Q9EQH3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Vps35Q9EQH3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.06■□□□□ 0.32
Vps35Q9EQH3 Gm37025-201ENSMUST00000195159 829 ntBASIC17.06■□□□□ 0.32
Vps35Q9EQH3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps35Q9EQH3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.06■□□□□ 0.32
Vps35Q9EQH3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vps35Q9EQH3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps35Q9EQH3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Vps35Q9EQH3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Vps35Q9EQH3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps35Q9EQH3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Vps35Q9EQH3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps35Q9EQH3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps35Q9EQH3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps35Q9EQH3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps35Q9EQH3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps35Q9EQH3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps35Q9EQH3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps35Q9EQH3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps35Q9EQH3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Vps35Q9EQH3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.05■□□□□ 0.32
Vps35Q9EQH3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.05■□□□□ 0.32
Vps35Q9EQH3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps35Q9EQH3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Vps35Q9EQH3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps35Q9EQH3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vps35Q9EQH3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps35Q9EQH3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.05■□□□□ 0.32
Vps35Q9EQH3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Vps35Q9EQH3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vps35Q9EQH3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps35Q9EQH3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps35Q9EQH3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps35Q9EQH3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps35Q9EQH3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Vps35Q9EQH3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps35Q9EQH3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Vps35Q9EQH3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps35Q9EQH3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps35Q9EQH3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps35Q9EQH3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vps35Q9EQH3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.04■□□□□ 0.32
Vps35Q9EQH3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.04■□□□□ 0.32
Vps35Q9EQH3 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.04■□□□□ 0.32
Vps35Q9EQH3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps35Q9EQH3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps35Q9EQH3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps35Q9EQH3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps35Q9EQH3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Vps35Q9EQH3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.04■□□□□ 0.32
Vps35Q9EQH3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Vps35Q9EQH3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps35Q9EQH3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps35Q9EQH3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps35Q9EQH3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps35Q9EQH3 Gm30025-201ENSMUST00000218555 728 ntBASIC17.03■□□□□ 0.32
Vps35Q9EQH3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps35Q9EQH3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps35Q9EQH3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms