Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Asic1-205ENSMUST00000228185 1818 ntBASIC14.81□□□□□ -0.04
Mbd3l1Q9D9H3 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mbd3l1Q9D9H3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mbd3l1Q9D9H3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.81□□□□□ -0.04
Mbd3l1Q9D9H3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mbd3l1Q9D9H3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mbd3l1Q9D9H3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mbd3l1Q9D9H3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mbd3l1Q9D9H3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mbd3l1Q9D9H3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Mbd3l1Q9D9H3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Mbd3l1Q9D9H3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mbd3l1Q9D9H3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Mbd3l1Q9D9H3 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mbd3l1Q9D9H3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mbd3l1Q9D9H3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mbd3l1Q9D9H3 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mbd3l1Q9D9H3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3l1Q9D9H3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Mbd3l1Q9D9H3 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3l1Q9D9H3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3l1Q9D9H3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3l1Q9D9H3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3l1Q9D9H3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3l1Q9D9H3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3l1Q9D9H3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3l1Q9D9H3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3l1Q9D9H3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.8□□□□□ -0.04
Mbd3l1Q9D9H3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3l1Q9D9H3 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3l1Q9D9H3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3l1Q9D9H3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3l1Q9D9H3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3l1Q9D9H3 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3l1Q9D9H3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3l1Q9D9H3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mbd3l1Q9D9H3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Mbd3l1Q9D9H3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3l1Q9D9H3 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3l1Q9D9H3 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Mbd3l1Q9D9H3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3l1Q9D9H3 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.79□□□□□ -0.04
Mbd3l1Q9D9H3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3l1Q9D9H3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3l1Q9D9H3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3l1Q9D9H3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3l1Q9D9H3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3l1Q9D9H3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3l1Q9D9H3 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.79□□□□□ -0.04
Mbd3l1Q9D9H3 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Mbd3l1Q9D9H3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3l1Q9D9H3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.79□□□□□ -0.04
Mbd3l1Q9D9H3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
Mbd3l1Q9D9H3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Mbd3l1Q9D9H3 Nsd1-203ENSMUST00000224156 1149 ntBASIC14.79□□□□□ -0.04
Mbd3l1Q9D9H3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3l1Q9D9H3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.79□□□□□ -0.04
Mbd3l1Q9D9H3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3l1Q9D9H3 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3l1Q9D9H3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3l1Q9D9H3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3l1Q9D9H3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3l1Q9D9H3 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mbd3l1Q9D9H3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3l1Q9D9H3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3l1Q9D9H3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.78□□□□□ -0.04
Mbd3l1Q9D9H3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3l1Q9D9H3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3l1Q9D9H3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3l1Q9D9H3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3l1Q9D9H3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3l1Q9D9H3 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.78□□□□□ -0.04
Mbd3l1Q9D9H3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3l1Q9D9H3 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3l1Q9D9H3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.78□□□□□ -0.04
Mbd3l1Q9D9H3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3l1Q9D9H3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3l1Q9D9H3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3l1Q9D9H3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3l1Q9D9H3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Mbd3l1Q9D9H3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3l1Q9D9H3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3l1Q9D9H3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3l1Q9D9H3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3l1Q9D9H3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3l1Q9D9H3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mbd3l1Q9D9H3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Mbd3l1Q9D9H3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Mbd3l1Q9D9H3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
Mbd3l1Q9D9H3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Mbd3l1Q9D9H3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Mbd3l1Q9D9H3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Mbd3l1Q9D9H3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Mbd3l1Q9D9H3 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Mbd3l1Q9D9H3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Mbd3l1Q9D9H3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Mbd3l1Q9D9H3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.77□□□□□ -0.05
Mbd3l1Q9D9H3 Mir8112-201ENSMUST00000184382 131 ntBASIC14.77□□□□□ -0.05
Mbd3l1Q9D9H3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC14.77□□□□□ -0.05
Mbd3l1Q9D9H3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms