Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim42Q9D2H5 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim42Q9D2H5 Gm6420-201ENSMUST00000193885 723 ntBASIC17.07■□□□□ 0.32
Trim42Q9D2H5 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.07■□□□□ 0.32
Trim42Q9D2H5 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim42Q9D2H5 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim42Q9D2H5 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim42Q9D2H5 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim42Q9D2H5 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim42Q9D2H5 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim42Q9D2H5 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim42Q9D2H5 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim42Q9D2H5 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim42Q9D2H5 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim42Q9D2H5 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.06■□□□□ 0.32
Trim42Q9D2H5 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim42Q9D2H5 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim42Q9D2H5 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim42Q9D2H5 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim42Q9D2H5 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim42Q9D2H5 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim42Q9D2H5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim42Q9D2H5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim42Q9D2H5 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim42Q9D2H5 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Trim42Q9D2H5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.06■□□□□ 0.32
Trim42Q9D2H5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim42Q9D2H5 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Trim42Q9D2H5 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim42Q9D2H5 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim42Q9D2H5 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim42Q9D2H5 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim42Q9D2H5 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim42Q9D2H5 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim42Q9D2H5 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim42Q9D2H5 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim42Q9D2H5 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.05■□□□□ 0.32
Trim42Q9D2H5 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim42Q9D2H5 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim42Q9D2H5 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Trim42Q9D2H5 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim42Q9D2H5 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim42Q9D2H5 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim42Q9D2H5 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.05■□□□□ 0.32
Trim42Q9D2H5 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim42Q9D2H5 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim42Q9D2H5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trim42Q9D2H5 Nespas-201ENSMUST00000143738 1083 ntBASIC17.05■□□□□ 0.32
Trim42Q9D2H5 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Trim42Q9D2H5 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.05■□□□□ 0.32
Trim42Q9D2H5 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.05■□□□□ 0.32
Trim42Q9D2H5 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Trim42Q9D2H5 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim42Q9D2H5 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim42Q9D2H5 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trim42Q9D2H5 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trim42Q9D2H5 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim42Q9D2H5 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim42Q9D2H5 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim42Q9D2H5 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim42Q9D2H5 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim42Q9D2H5 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim42Q9D2H5 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim42Q9D2H5 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trim42Q9D2H5 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trim42Q9D2H5 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim42Q9D2H5 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim42Q9D2H5 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim42Q9D2H5 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim42Q9D2H5 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.04■□□□□ 0.32
Trim42Q9D2H5 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim42Q9D2H5 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim42Q9D2H5 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim42Q9D2H5 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trim42Q9D2H5 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim42Q9D2H5 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim42Q9D2H5 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim42Q9D2H5 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim42Q9D2H5 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim42Q9D2H5 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim42Q9D2H5 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim42Q9D2H5 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim42Q9D2H5 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim42Q9D2H5 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim42Q9D2H5 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim42Q9D2H5 Gm15039-201ENSMUST00000118914 875 ntBASIC17.03■□□□□ 0.32
Trim42Q9D2H5 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.03■□□□□ 0.32
Trim42Q9D2H5 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim42Q9D2H5 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trim42Q9D2H5 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim42Q9D2H5 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.03■□□□□ 0.32
Trim42Q9D2H5 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim42Q9D2H5 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim42Q9D2H5 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim42Q9D2H5 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim42Q9D2H5 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim42Q9D2H5 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim42Q9D2H5 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim42Q9D2H5 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim42Q9D2H5 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms