Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rita1Q9D1H0 Gm23634-201ENSMUST00000175071 91 ntBASIC15.7■□□□□ 0.1
Rita1Q9D1H0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rita1Q9D1H0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.7■□□□□ 0.1
Rita1Q9D1H0 Gm21559-201ENSMUST00000220638 855 ntBASIC15.7■□□□□ 0.1
Rita1Q9D1H0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rita1Q9D1H0 Gm8587-201ENSMUST00000076538 843 ntBASIC15.7■□□□□ 0.1
Rita1Q9D1H0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rita1Q9D1H0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rita1Q9D1H0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rita1Q9D1H0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rita1Q9D1H0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rita1Q9D1H0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rita1Q9D1H0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rita1Q9D1H0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rita1Q9D1H0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rita1Q9D1H0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rita1Q9D1H0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rita1Q9D1H0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rita1Q9D1H0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rita1Q9D1H0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rita1Q9D1H0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Rita1Q9D1H0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rita1Q9D1H0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rita1Q9D1H0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rita1Q9D1H0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rita1Q9D1H0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.69■□□□□ 0.1
Rita1Q9D1H0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rita1Q9D1H0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rita1Q9D1H0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rita1Q9D1H0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rita1Q9D1H0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rita1Q9D1H0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rita1Q9D1H0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rita1Q9D1H0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rita1Q9D1H0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rita1Q9D1H0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rita1Q9D1H0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rita1Q9D1H0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rita1Q9D1H0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rita1Q9D1H0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rita1Q9D1H0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rita1Q9D1H0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rita1Q9D1H0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rita1Q9D1H0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rita1Q9D1H0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rita1Q9D1H0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.68■□□□□ 0.1
Rita1Q9D1H0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rita1Q9D1H0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rita1Q9D1H0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rita1Q9D1H0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
Rita1Q9D1H0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rita1Q9D1H0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rita1Q9D1H0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rita1Q9D1H0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rita1Q9D1H0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.67■□□□□ 0.1
Rita1Q9D1H0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rita1Q9D1H0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rita1Q9D1H0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rita1Q9D1H0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rita1Q9D1H0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.67■□□□□ 0.1
Rita1Q9D1H0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Rita1Q9D1H0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rita1Q9D1H0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rita1Q9D1H0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.67■□□□□ 0.1
Rita1Q9D1H0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rita1Q9D1H0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Rita1Q9D1H0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rita1Q9D1H0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rita1Q9D1H0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rita1Q9D1H0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.67■□□□□ 0.1
Rita1Q9D1H0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rita1Q9D1H0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rita1Q9D1H0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rita1Q9D1H0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rita1Q9D1H0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rita1Q9D1H0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rita1Q9D1H0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rita1Q9D1H0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rita1Q9D1H0 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.66■□□□□ 0.1
Rita1Q9D1H0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rita1Q9D1H0 Gm26039-201ENSMUST00000158152 144 ntBASIC15.66■□□□□ 0.1
Rita1Q9D1H0 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.66■□□□□ 0.1
Rita1Q9D1H0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.66■□□□□ 0.1
Rita1Q9D1H0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rita1Q9D1H0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rita1Q9D1H0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rita1Q9D1H0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rita1Q9D1H0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rita1Q9D1H0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rita1Q9D1H0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rita1Q9D1H0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rita1Q9D1H0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rita1Q9D1H0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rita1Q9D1H0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rita1Q9D1H0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rita1Q9D1H0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rita1Q9D1H0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.65■□□□□ 0.1
Rita1Q9D1H0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rita1Q9D1H0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms