Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Raet1eQ9CZQ6 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Raet1eQ9CZQ6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.02■□□□□ -0
Raet1eQ9CZQ6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Raet1eQ9CZQ6 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.02■□□□□ -0
Raet1eQ9CZQ6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Raet1eQ9CZQ6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Raet1eQ9CZQ6 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.02■□□□□ -0
Raet1eQ9CZQ6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Raet1eQ9CZQ6 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Raet1eQ9CZQ6 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Raet1eQ9CZQ6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Raet1eQ9CZQ6 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.02■□□□□ -0
Raet1eQ9CZQ6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Raet1eQ9CZQ6 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Raet1eQ9CZQ6 Mir2861-201ENSMUST00000175539 82 ntBASIC15.02■□□□□ -0
Raet1eQ9CZQ6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.02■□□□□ -0
Raet1eQ9CZQ6 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Raet1eQ9CZQ6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Raet1eQ9CZQ6 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Raet1eQ9CZQ6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Raet1eQ9CZQ6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Raet1eQ9CZQ6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Raet1eQ9CZQ6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Raet1eQ9CZQ6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Raet1eQ9CZQ6 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Raet1eQ9CZQ6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Raet1eQ9CZQ6 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Raet1eQ9CZQ6 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Raet1eQ9CZQ6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Raet1eQ9CZQ6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.01□□□□□ -0.01
Raet1eQ9CZQ6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Raet1eQ9CZQ6 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Raet1eQ9CZQ6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.01□□□□□ -0.01
Raet1eQ9CZQ6 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Raet1eQ9CZQ6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.01□□□□□ -0.01
Raet1eQ9CZQ6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Raet1eQ9CZQ6 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Raet1eQ9CZQ6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Raet1eQ9CZQ6 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Raet1eQ9CZQ6 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Raet1eQ9CZQ6 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Raet1eQ9CZQ6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Raet1eQ9CZQ6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Raet1eQ9CZQ6 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Raet1eQ9CZQ6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Raet1eQ9CZQ6 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Raet1eQ9CZQ6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Raet1eQ9CZQ6 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Raet1eQ9CZQ6 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Raet1eQ9CZQ6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
Raet1eQ9CZQ6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15□□□□□ -0.01
Raet1eQ9CZQ6 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Raet1eQ9CZQ6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15□□□□□ -0.01
Raet1eQ9CZQ6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15□□□□□ -0.01
Raet1eQ9CZQ6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15□□□□□ -0.01
Raet1eQ9CZQ6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Raet1eQ9CZQ6 Appbp2os-202ENSMUST00000206972 447 ntBASIC15□□□□□ -0.01
Raet1eQ9CZQ6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Raet1eQ9CZQ6 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Raet1eQ9CZQ6 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Raet1eQ9CZQ6 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Raet1eQ9CZQ6 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Raet1eQ9CZQ6 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Raet1eQ9CZQ6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Raet1eQ9CZQ6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Raet1eQ9CZQ6 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Raet1eQ9CZQ6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Raet1eQ9CZQ6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.99□□□□□ -0.01
Raet1eQ9CZQ6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.99□□□□□ -0.01
Raet1eQ9CZQ6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Raet1eQ9CZQ6 Zfp783-201ENSMUST00000095946 670 ntBASIC14.99□□□□□ -0.01
Raet1eQ9CZQ6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Raet1eQ9CZQ6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Raet1eQ9CZQ6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Raet1eQ9CZQ6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Raet1eQ9CZQ6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Raet1eQ9CZQ6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Raet1eQ9CZQ6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.99□□□□□ -0.01
Raet1eQ9CZQ6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Raet1eQ9CZQ6 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms