Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Q9CYI0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.83■□□□□ 0.6
Q9CYI0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Q9CYI0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Q9CYI0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CYI0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Q9CYI0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CYI0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Q9CYI0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
Q9CYI0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CYI0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Q9CYI0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CYI0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CYI0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.82■□□□□ 0.6
Q9CYI0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CYI0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Q9CYI0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
Q9CYI0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CYI0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Q9CYI0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CYI0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Q9CYI0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CYI0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CYI0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Q9CYI0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.81■□□□□ 0.6
Q9CYI0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CYI0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CYI0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Q9CYI0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CYI0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CYI0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CYI0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CYI0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CYI0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CYI0 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.81■□□□□ 0.6
Q9CYI0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CYI0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.81■□□□□ 0.6
Q9CYI0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CYI0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Q9CYI0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CYI0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Q9CYI0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.8■□□□□ 0.6
Q9CYI0 Gm7213-201ENSMUST00000215977 950 ntBASIC18.8■□□□□ 0.6
Q9CYI0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.8■□□□□ 0.6
Q9CYI0 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.8■□□□□ 0.6
Q9CYI0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CYI0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CYI0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CYI0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CYI0 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CYI0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Q9CYI0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CYI0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.79■□□□□ 0.6
Q9CYI0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CYI0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Q9CYI0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CYI0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CYI0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Q9CYI0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CYI0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Q9CYI0 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CYI0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CYI0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CYI0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CYI0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CYI0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Q9CYI0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Q9CYI0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.78■□□□□ 0.6
Q9CYI0 Gm5587-201ENSMUST00000206270 674 ntBASIC18.78■□□□□ 0.6
Q9CYI0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Q9CYI0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CYI0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CYI0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CYI0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CYI0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CYI0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Q9CYI0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CYI0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.78■□□□□ 0.6
Q9CYI0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Q9CYI0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.77■□□□□ 0.6
Q9CYI0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9CYI0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9CYI0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Q9CYI0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9CYI0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9CYI0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.77■□□□□ 0.6
Q9CYI0 Gm9013-201ENSMUST00000132939 882 ntBASIC18.77■□□□□ 0.6
Q9CYI0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9CYI0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.77■□□□□ 0.6
Q9CYI0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9CYI0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9CYI0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Q9CYI0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9CYI0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Q9CYI0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Q9CYI0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Q9CYI0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Q9CYI0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Q9CYI0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Q9CYI0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms