Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ssu72Q9CY97 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ssu72Q9CY97 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Ssu72Q9CY97 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.95■□□□□ 0.3
Ssu72Q9CY97 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ssu72Q9CY97 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ssu72Q9CY97 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.95■□□□□ 0.3
Ssu72Q9CY97 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.95■□□□□ 0.3
Ssu72Q9CY97 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ssu72Q9CY97 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ssu72Q9CY97 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ssu72Q9CY97 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ssu72Q9CY97 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ssu72Q9CY97 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ssu72Q9CY97 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ssu72Q9CY97 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ssu72Q9CY97 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.95■□□□□ 0.3
Ssu72Q9CY97 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ssu72Q9CY97 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.95■□□□□ 0.3
Ssu72Q9CY97 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ssu72Q9CY97 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ssu72Q9CY97 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Ssu72Q9CY97 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ssu72Q9CY97 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ssu72Q9CY97 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.94■□□□□ 0.3
Ssu72Q9CY97 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.94■□□□□ 0.3
Ssu72Q9CY97 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.94■□□□□ 0.3
Ssu72Q9CY97 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ssu72Q9CY97 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ssu72Q9CY97 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ssu72Q9CY97 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Ssu72Q9CY97 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.94■□□□□ 0.3
Ssu72Q9CY97 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ssu72Q9CY97 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ssu72Q9CY97 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ssu72Q9CY97 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ssu72Q9CY97 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.94■□□□□ 0.3
Ssu72Q9CY97 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Ssu72Q9CY97 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ssu72Q9CY97 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ssu72Q9CY97 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ssu72Q9CY97 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ssu72Q9CY97 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ssu72Q9CY97 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssu72Q9CY97 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssu72Q9CY97 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssu72Q9CY97 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssu72Q9CY97 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssu72Q9CY97 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ssu72Q9CY97 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssu72Q9CY97 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssu72Q9CY97 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssu72Q9CY97 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssu72Q9CY97 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ssu72Q9CY97 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssu72Q9CY97 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssu72Q9CY97 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssu72Q9CY97 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ssu72Q9CY97 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ssu72Q9CY97 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssu72Q9CY97 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ssu72Q9CY97 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.93■□□□□ 0.3
Ssu72Q9CY97 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssu72Q9CY97 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssu72Q9CY97 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssu72Q9CY97 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssu72Q9CY97 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ssu72Q9CY97 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssu72Q9CY97 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssu72Q9CY97 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ssu72Q9CY97 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Ssu72Q9CY97 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ssu72Q9CY97 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.92■□□□□ 0.3
Ssu72Q9CY97 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.92■□□□□ 0.3
Ssu72Q9CY97 Gm5408-201ENSMUST00000197998 747 ntBASIC16.92■□□□□ 0.3
Ssu72Q9CY97 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssu72Q9CY97 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssu72Q9CY97 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssu72Q9CY97 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssu72Q9CY97 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ssu72Q9CY97 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssu72Q9CY97 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssu72Q9CY97 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssu72Q9CY97 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssu72Q9CY97 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssu72Q9CY97 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ssu72Q9CY97 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssu72Q9CY97 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssu72Q9CY97 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ssu72Q9CY97 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssu72Q9CY97 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ssu72Q9CY97 Gm13148-201ENSMUST00000118892 745 ntBASIC16.91■□□□□ 0.3
Ssu72Q9CY97 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.91■□□□□ 0.3
Ssu72Q9CY97 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ssu72Q9CY97 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssu72Q9CY97 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ssu72Q9CY97 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssu72Q9CY97 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.91■□□□□ 0.3
Ssu72Q9CY97 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssu72Q9CY97 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms