Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nip7Q9CXK8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nip7Q9CXK8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nip7Q9CXK8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Nip7Q9CXK8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Nip7Q9CXK8 Gm13884-201ENSMUST00000118103 829 ntBASIC21.21■□□□□ 0.99
Nip7Q9CXK8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nip7Q9CXK8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nip7Q9CXK8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nip7Q9CXK8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Nip7Q9CXK8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nip7Q9CXK8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nip7Q9CXK8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nip7Q9CXK8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nip7Q9CXK8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC21.21■□□□□ 0.99
Nip7Q9CXK8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.2■□□□□ 0.99
Nip7Q9CXK8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nip7Q9CXK8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nip7Q9CXK8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Nip7Q9CXK8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.2■□□□□ 0.98
Nip7Q9CXK8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nip7Q9CXK8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC21.2■□□□□ 0.98
Nip7Q9CXK8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC21.2■□□□□ 0.98
Nip7Q9CXK8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC21.2■□□□□ 0.98
Nip7Q9CXK8 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nip7Q9CXK8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC21.2■□□□□ 0.98
Nip7Q9CXK8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC21.2■□□□□ 0.98
Nip7Q9CXK8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nip7Q9CXK8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nip7Q9CXK8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nip7Q9CXK8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nip7Q9CXK8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Nip7Q9CXK8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nip7Q9CXK8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nip7Q9CXK8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Nip7Q9CXK8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nip7Q9CXK8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nip7Q9CXK8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nip7Q9CXK8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Nip7Q9CXK8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nip7Q9CXK8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Nip7Q9CXK8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nip7Q9CXK8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nip7Q9CXK8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nip7Q9CXK8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nip7Q9CXK8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nip7Q9CXK8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nip7Q9CXK8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC21.18■□□□□ 0.98
Nip7Q9CXK8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nip7Q9CXK8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nip7Q9CXK8 Gm6190-201ENSMUST00000220683 1374 ntBASIC21.18■□□□□ 0.98
Nip7Q9CXK8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nip7Q9CXK8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nip7Q9CXK8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nip7Q9CXK8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nip7Q9CXK8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nip7Q9CXK8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nip7Q9CXK8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Nip7Q9CXK8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Nip7Q9CXK8 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Nip7Q9CXK8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC21.17■□□□□ 0.98
Nip7Q9CXK8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Nip7Q9CXK8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nip7Q9CXK8 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.17■□□□□ 0.98
Nip7Q9CXK8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nip7Q9CXK8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC21.17■□□□□ 0.98
Nip7Q9CXK8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nip7Q9CXK8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nip7Q9CXK8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nip7Q9CXK8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nip7Q9CXK8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nip7Q9CXK8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nip7Q9CXK8 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nip7Q9CXK8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC21.16■□□□□ 0.98
Nip7Q9CXK8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Nip7Q9CXK8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nip7Q9CXK8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nip7Q9CXK8 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nip7Q9CXK8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nip7Q9CXK8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nip7Q9CXK8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nip7Q9CXK8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nip7Q9CXK8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nip7Q9CXK8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nip7Q9CXK8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Nip7Q9CXK8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nip7Q9CXK8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Nip7Q9CXK8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nip7Q9CXK8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nip7Q9CXK8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC21.15■□□□□ 0.98
Nip7Q9CXK8 Gm44450-201ENSMUST00000199528 114 ntBASIC21.15■□□□□ 0.98
Nip7Q9CXK8 Gm6443-201ENSMUST00000203599 874 ntBASIC21.15■□□□□ 0.98
Nip7Q9CXK8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nip7Q9CXK8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Nip7Q9CXK8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC21.15■□□□□ 0.98
Nip7Q9CXK8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nip7Q9CXK8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Nip7Q9CXK8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC21.14■□□□□ 0.98
Nip7Q9CXK8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Nip7Q9CXK8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms