Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chd1lQ9CXF7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chd1lQ9CXF7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.31■□□□□ 0.68
Chd1lQ9CXF7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chd1lQ9CXF7 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chd1lQ9CXF7 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1lQ9CXF7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1lQ9CXF7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1lQ9CXF7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1lQ9CXF7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Chd1lQ9CXF7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1lQ9CXF7 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1lQ9CXF7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.3■□□□□ 0.68
Chd1lQ9CXF7 Gm2399-201ENSMUST00000104944 225 ntBASIC19.3■□□□□ 0.68
Chd1lQ9CXF7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1lQ9CXF7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1lQ9CXF7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1lQ9CXF7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1lQ9CXF7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1lQ9CXF7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1lQ9CXF7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1lQ9CXF7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Chd1lQ9CXF7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1lQ9CXF7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1lQ9CXF7 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1lQ9CXF7 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1lQ9CXF7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1lQ9CXF7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Chd1lQ9CXF7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1lQ9CXF7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Chd1lQ9CXF7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.29■□□□□ 0.68
Chd1lQ9CXF7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.29■□□□□ 0.68
Chd1lQ9CXF7 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1lQ9CXF7 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1lQ9CXF7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1lQ9CXF7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1lQ9CXF7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Chd1lQ9CXF7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Chd1lQ9CXF7 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Chd1lQ9CXF7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1lQ9CXF7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1lQ9CXF7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1lQ9CXF7 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1lQ9CXF7 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1lQ9CXF7 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Chd1lQ9CXF7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Chd1lQ9CXF7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1lQ9CXF7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1lQ9CXF7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1lQ9CXF7 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Chd1lQ9CXF7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Chd1lQ9CXF7 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1lQ9CXF7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Chd1lQ9CXF7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1lQ9CXF7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Chd1lQ9CXF7 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
Chd1lQ9CXF7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.28■□□□□ 0.68
Chd1lQ9CXF7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1lQ9CXF7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1lQ9CXF7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1lQ9CXF7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1lQ9CXF7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1lQ9CXF7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1lQ9CXF7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Chd1lQ9CXF7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1lQ9CXF7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1lQ9CXF7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Chd1lQ9CXF7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1lQ9CXF7 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chd1lQ9CXF7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Chd1lQ9CXF7 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.27■□□□□ 0.68
Chd1lQ9CXF7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chd1lQ9CXF7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chd1lQ9CXF7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chd1lQ9CXF7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Chd1lQ9CXF7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Chd1lQ9CXF7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Chd1lQ9CXF7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Chd1lQ9CXF7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Chd1lQ9CXF7 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chd1lQ9CXF7 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chd1lQ9CXF7 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.67
Chd1lQ9CXF7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC19.27■□□□□ 0.67
Chd1lQ9CXF7 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1lQ9CXF7 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1lQ9CXF7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1lQ9CXF7 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1lQ9CXF7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1lQ9CXF7 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Chd1lQ9CXF7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.26■□□□□ 0.67
Chd1lQ9CXF7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1lQ9CXF7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1lQ9CXF7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1lQ9CXF7 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1lQ9CXF7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.26■□□□□ 0.67
Chd1lQ9CXF7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1lQ9CXF7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.26■□□□□ 0.67
Chd1lQ9CXF7 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Chd1lQ9CXF7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1lQ9CXF7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms