Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC9.16□□□□□ -0.94
Sec61bQ9CQS8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Sec61bQ9CQS8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Sec61bQ9CQS8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Sec61bQ9CQS8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Sec61bQ9CQS8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 Gm27704-201ENSMUST00000185094 107 ntBASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 Gm43275-201ENSMUST00000202053 1020 ntBASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 Gm7370-201ENSMUST00000219471 767 ntBASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 AC132446.1-201ENSMUST00000222655 226 ntBASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Sec61bQ9CQS8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Sec61bQ9CQS8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC9.15□□□□□ -0.95
Sec61bQ9CQS8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Sec61bQ9CQS8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Sec61bQ9CQS8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
Sec61bQ9CQS8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Sec61bQ9CQS8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Sec61bQ9CQS8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Sec61bQ9CQS8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Gm26039-201ENSMUST00000158152 144 ntBASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Gm43213-201ENSMUST00000151866 1790 ntBASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Sec61bQ9CQS8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Sec61bQ9CQS8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms