Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm7Q9CQQ8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Lsm7Q9CQQ8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Lsm7Q9CQQ8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm7Q9CQQ8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm7Q9CQQ8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm7Q9CQQ8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm7Q9CQQ8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.26■□□□□ 0.35
Lsm7Q9CQQ8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Lsm7Q9CQQ8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.26■□□□□ 0.35
Lsm7Q9CQQ8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm7Q9CQQ8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm7Q9CQQ8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Lsm7Q9CQQ8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm7Q9CQQ8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm7Q9CQQ8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm7Q9CQQ8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm7Q9CQQ8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Lsm7Q9CQQ8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm7Q9CQQ8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm7Q9CQQ8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.25■□□□□ 0.35
Lsm7Q9CQQ8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm7Q9CQQ8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Lsm7Q9CQQ8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm7Q9CQQ8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm7Q9CQQ8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm7Q9CQQ8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm7Q9CQQ8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm7Q9CQQ8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm7Q9CQQ8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm7Q9CQQ8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Lsm7Q9CQQ8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm7Q9CQQ8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm7Q9CQQ8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm7Q9CQQ8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.24■□□□□ 0.35
Lsm7Q9CQQ8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm7Q9CQQ8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm7Q9CQQ8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm7Q9CQQ8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm7Q9CQQ8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Lsm7Q9CQQ8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.24■□□□□ 0.35
Lsm7Q9CQQ8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm7Q9CQQ8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm7Q9CQQ8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm7Q9CQQ8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm7Q9CQQ8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.24■□□□□ 0.35
Lsm7Q9CQQ8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.24■□□□□ 0.35
Lsm7Q9CQQ8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm7Q9CQQ8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm7Q9CQQ8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm7Q9CQQ8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm7Q9CQQ8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm7Q9CQQ8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm7Q9CQQ8 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Lsm7Q9CQQ8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm7Q9CQQ8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm7Q9CQQ8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm7Q9CQQ8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm7Q9CQQ8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm7Q9CQQ8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm7Q9CQQ8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm7Q9CQQ8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm7Q9CQQ8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm7Q9CQQ8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Lsm7Q9CQQ8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Lsm7Q9CQQ8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm7Q9CQQ8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm7Q9CQQ8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm7Q9CQQ8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm7Q9CQQ8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm7Q9CQQ8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.22■□□□□ 0.35
Lsm7Q9CQQ8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Lsm7Q9CQQ8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Lsm7Q9CQQ8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm7Q9CQQ8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.22■□□□□ 0.35
Lsm7Q9CQQ8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.22■□□□□ 0.35
Lsm7Q9CQQ8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm7Q9CQQ8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Lsm7Q9CQQ8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm7Q9CQQ8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.22■□□□□ 0.35
Lsm7Q9CQQ8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm7Q9CQQ8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm7Q9CQQ8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm7Q9CQQ8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm7Q9CQQ8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm7Q9CQQ8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm7Q9CQQ8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Lsm7Q9CQQ8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm7Q9CQQ8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
Lsm7Q9CQQ8 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.21■□□□□ 0.35
Lsm7Q9CQQ8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Lsm7Q9CQQ8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm7Q9CQQ8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm7Q9CQQ8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm7Q9CQQ8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm7Q9CQQ8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm7Q9CQQ8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm7Q9CQQ8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Lsm7Q9CQQ8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm7Q9CQQ8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms