Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cotl1Q9CQI6 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cotl1Q9CQI6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cotl1Q9CQI6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cotl1Q9CQI6 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cotl1Q9CQI6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cotl1Q9CQI6 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.45□□□□□ -0.26
Cotl1Q9CQI6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cotl1Q9CQI6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Cotl1Q9CQI6 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 Gm21168-201ENSMUST00000199646 1096 ntBASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cotl1Q9CQI6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms