Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf111Q99ML9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf111Q99ML9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf111Q99ML9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf111Q99ML9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf111Q99ML9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf111Q99ML9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.55■□□□□ 0.24
Rnf111Q99ML9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf111Q99ML9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Rnf111Q99ML9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Rnf111Q99ML9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Rnf111Q99ML9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Rnf111Q99ML9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rnf111Q99ML9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf111Q99ML9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf111Q99ML9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf111Q99ML9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf111Q99ML9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf111Q99ML9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf111Q99ML9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Gm10418-201ENSMUST00000100943 576 ntBASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Gm20760-201ENSMUST00000179197 648 ntBASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.54■□□□□ 0.24
Rnf111Q99ML9 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.53■□□□□ 0.24
Rnf111Q99ML9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rnf111Q99ML9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Rnf111Q99ML9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf111Q99ML9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf111Q99ML9 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.53■□□□□ 0.24
Rnf111Q99ML9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf111Q99ML9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.53■□□□□ 0.24
Rnf111Q99ML9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf111Q99ML9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.53■□□□□ 0.24
Rnf111Q99ML9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Rnf111Q99ML9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.53■□□□□ 0.24
Rnf111Q99ML9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf111Q99ML9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf111Q99ML9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf111Q99ML9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf111Q99ML9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf111Q99ML9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rnf111Q99ML9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf111Q99ML9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf111Q99ML9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rnf111Q99ML9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf111Q99ML9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf111Q99ML9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.53■□□□□ 0.24
Rnf111Q99ML9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf111Q99ML9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf111Q99ML9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf111Q99ML9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.52■□□□□ 0.24
Rnf111Q99ML9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf111Q99ML9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Rnf111Q99ML9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.52■□□□□ 0.24
Rnf111Q99ML9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.52■□□□□ 0.24
Rnf111Q99ML9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Rnf111Q99ML9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf111Q99ML9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Rnf111Q99ML9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Rnf111Q99ML9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf111Q99ML9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf111Q99ML9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf111Q99ML9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.52■□□□□ 0.23
Rnf111Q99ML9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf111Q99ML9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf111Q99ML9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf111Q99ML9 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.51■□□□□ 0.23
Rnf111Q99ML9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf111Q99ML9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf111Q99ML9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf111Q99ML9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf111Q99ML9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf111Q99ML9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf111Q99ML9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf111Q99ML9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf111Q99ML9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf111Q99ML9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms