Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scrt1Q99M85 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scrt1Q99M85 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Scrt1Q99M85 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scrt1Q99M85 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scrt1Q99M85 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scrt1Q99M85 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scrt1Q99M85 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scrt1Q99M85 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scrt1Q99M85 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Scrt1Q99M85 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scrt1Q99M85 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Scrt1Q99M85 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scrt1Q99M85 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Scrt1Q99M85 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scrt1Q99M85 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scrt1Q99M85 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Scrt1Q99M85 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.93□□□□□ -0.02
Scrt1Q99M85 Gm25925-201ENSMUST00000158314 306 ntBASIC14.93□□□□□ -0.02
Scrt1Q99M85 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.93□□□□□ -0.02
Scrt1Q99M85 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scrt1Q99M85 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scrt1Q99M85 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.93□□□□□ -0.02
Scrt1Q99M85 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scrt1Q99M85 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scrt1Q99M85 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.93□□□□□ -0.02
Scrt1Q99M85 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scrt1Q99M85 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Scrt1Q99M85 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scrt1Q99M85 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scrt1Q99M85 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Scrt1Q99M85 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scrt1Q99M85 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scrt1Q99M85 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scrt1Q99M85 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Scrt1Q99M85 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scrt1Q99M85 Gm24589-201ENSMUST00000116692 94 ntBASIC14.92□□□□□ -0.02
Scrt1Q99M85 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scrt1Q99M85 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.92□□□□□ -0.02
Scrt1Q99M85 Mzt1-203ENSMUST00000227948 952 ntBASIC14.92□□□□□ -0.02
Scrt1Q99M85 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Scrt1Q99M85 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scrt1Q99M85 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.92□□□□□ -0.02
Scrt1Q99M85 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scrt1Q99M85 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scrt1Q99M85 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scrt1Q99M85 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scrt1Q99M85 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scrt1Q99M85 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Scrt1Q99M85 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scrt1Q99M85 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Scrt1Q99M85 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scrt1Q99M85 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Scrt1Q99M85 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.91□□□□□ -0.02
Scrt1Q99M85 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scrt1Q99M85 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.91□□□□□ -0.02
Scrt1Q99M85 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scrt1Q99M85 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.91□□□□□ -0.02
Scrt1Q99M85 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Scrt1Q99M85 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scrt1Q99M85 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.91□□□□□ -0.02
Scrt1Q99M85 Gm7213-201ENSMUST00000215977 950 ntBASIC14.91□□□□□ -0.02
Scrt1Q99M85 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scrt1Q99M85 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scrt1Q99M85 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scrt1Q99M85 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scrt1Q99M85 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scrt1Q99M85 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scrt1Q99M85 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scrt1Q99M85 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scrt1Q99M85 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Scrt1Q99M85 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Scrt1Q99M85 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.91□□□□□ -0.02
Scrt1Q99M85 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scrt1Q99M85 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Scrt1Q99M85 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scrt1Q99M85 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.9□□□□□ -0.02
Scrt1Q99M85 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scrt1Q99M85 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Scrt1Q99M85 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scrt1Q99M85 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scrt1Q99M85 Mir3081-201ENSMUST00000175305 84 ntBASIC14.9□□□□□ -0.02
Scrt1Q99M85 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scrt1Q99M85 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Scrt1Q99M85 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Scrt1Q99M85 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scrt1Q99M85 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scrt1Q99M85 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Scrt1Q99M85 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scrt1Q99M85 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Scrt1Q99M85 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scrt1Q99M85 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Scrt1Q99M85 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scrt1Q99M85 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scrt1Q99M85 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scrt1Q99M85 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scrt1Q99M85 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scrt1Q99M85 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scrt1Q99M85 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Scrt1Q99M85 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms