Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cstf1Q99LC2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cstf1Q99LC2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cstf1Q99LC2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cstf1Q99LC2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cstf1Q99LC2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cstf1Q99LC2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cstf1Q99LC2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cstf1Q99LC2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cstf1Q99LC2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cstf1Q99LC2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cstf1Q99LC2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Cstf1Q99LC2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17■□□□□ 0.31
Cstf1Q99LC2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Cstf1Q99LC2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cstf1Q99LC2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cstf1Q99LC2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17■□□□□ 0.31
Cstf1Q99LC2 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17■□□□□ 0.31
Cstf1Q99LC2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cstf1Q99LC2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17■□□□□ 0.31
Cstf1Q99LC2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cstf1Q99LC2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cstf1Q99LC2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17■□□□□ 0.31
Cstf1Q99LC2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cstf1Q99LC2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cstf1Q99LC2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cstf1Q99LC2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.99■□□□□ 0.31
Cstf1Q99LC2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cstf1Q99LC2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cstf1Q99LC2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cstf1Q99LC2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.99■□□□□ 0.31
Cstf1Q99LC2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cstf1Q99LC2 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.99■□□□□ 0.31
Cstf1Q99LC2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Cstf1Q99LC2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cstf1Q99LC2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Cstf1Q99LC2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.99■□□□□ 0.31
Cstf1Q99LC2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cstf1Q99LC2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cstf1Q99LC2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cstf1Q99LC2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cstf1Q99LC2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cstf1Q99LC2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cstf1Q99LC2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cstf1Q99LC2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cstf1Q99LC2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cstf1Q99LC2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cstf1Q99LC2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cstf1Q99LC2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Cstf1Q99LC2 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.98■□□□□ 0.31
Cstf1Q99LC2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cstf1Q99LC2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cstf1Q99LC2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cstf1Q99LC2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cstf1Q99LC2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cstf1Q99LC2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cstf1Q99LC2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cstf1Q99LC2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cstf1Q99LC2 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cstf1Q99LC2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cstf1Q99LC2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cstf1Q99LC2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cstf1Q99LC2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Cstf1Q99LC2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Cstf1Q99LC2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cstf1Q99LC2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cstf1Q99LC2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.96■□□□□ 0.31
Cstf1Q99LC2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.96■□□□□ 0.31
Cstf1Q99LC2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.96■□□□□ 0.31
Cstf1Q99LC2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cstf1Q99LC2 Gm27525-201ENSMUST00000184465 107 ntBASIC16.96■□□□□ 0.31
Cstf1Q99LC2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms