Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cdk9Q99J95 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.21■□□□□ 0.35
Cdk9Q99J95 Gm7514-201ENSMUST00000209475 934 ntBASIC17.21■□□□□ 0.35
Cdk9Q99J95 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cdk9Q99J95 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdk9Q99J95 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Cdk9Q99J95 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Cdk9Q99J95 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cdk9Q99J95 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cdk9Q99J95 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdk9Q99J95 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdk9Q99J95 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cdk9Q99J95 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cdk9Q99J95 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cdk9Q99J95 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdk9Q99J95 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdk9Q99J95 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdk9Q99J95 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdk9Q99J95 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdk9Q99J95 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Cdk9Q99J95 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cdk9Q99J95 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdk9Q99J95 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdk9Q99J95 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdk9Q99J95 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
Cdk9Q99J95 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.2■□□□□ 0.34
Cdk9Q99J95 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdk9Q99J95 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdk9Q99J95 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdk9Q99J95 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdk9Q99J95 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Cdk9Q99J95 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdk9Q99J95 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cdk9Q99J95 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdk9Q99J95 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cdk9Q99J95 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdk9Q99J95 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdk9Q99J95 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdk9Q99J95 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdk9Q99J95 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cdk9Q99J95 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdk9Q99J95 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cdk9Q99J95 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdk9Q99J95 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.19■□□□□ 0.34
Cdk9Q99J95 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.19■□□□□ 0.34
Cdk9Q99J95 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdk9Q99J95 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdk9Q99J95 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cdk9Q99J95 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdk9Q99J95 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdk9Q99J95 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdk9Q99J95 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdk9Q99J95 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cdk9Q99J95 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdk9Q99J95 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdk9Q99J95 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdk9Q99J95 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdk9Q99J95 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdk9Q99J95 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cdk9Q99J95 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdk9Q99J95 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdk9Q99J95 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdk9Q99J95 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdk9Q99J95 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdk9Q99J95 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdk9Q99J95 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.18■□□□□ 0.34
Cdk9Q99J95 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.18■□□□□ 0.34
Cdk9Q99J95 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdk9Q99J95 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cdk9Q99J95 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdk9Q99J95 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdk9Q99J95 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cdk9Q99J95 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdk9Q99J95 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdk9Q99J95 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Cdk9Q99J95 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdk9Q99J95 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdk9Q99J95 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdk9Q99J95 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.17■□□□□ 0.34
Cdk9Q99J95 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdk9Q99J95 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.17■□□□□ 0.34
Cdk9Q99J95 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdk9Q99J95 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdk9Q99J95 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdk9Q99J95 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdk9Q99J95 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdk9Q99J95 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk9Q99J95 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cdk9Q99J95 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.16■□□□□ 0.34
Cdk9Q99J95 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cdk9Q99J95 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk9Q99J95 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk9Q99J95 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk9Q99J95 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.16■□□□□ 0.34
Cdk9Q99J95 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.16■□□□□ 0.34
Cdk9Q99J95 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cdk9Q99J95 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cdk9Q99J95 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Cdk9Q99J95 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cdk9Q99J95 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms