Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha2Q91Y17 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.16■□□□□ 0.5
Pcdha2Q91Y17 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.16■□□□□ 0.5
Pcdha2Q91Y17 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha2Q91Y17 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha2Q91Y17 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha2Q91Y17 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha2Q91Y17 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Pcdha2Q91Y17 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pcdha2Q91Y17 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pcdha2Q91Y17 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha2Q91Y17 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha2Q91Y17 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha2Q91Y17 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Pcdha2Q91Y17 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha2Q91Y17 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha2Q91Y17 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha2Q91Y17 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha2Q91Y17 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdha2Q91Y17 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Pcdha2Q91Y17 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha2Q91Y17 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha2Q91Y17 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha2Q91Y17 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdha2Q91Y17 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha2Q91Y17 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha2Q91Y17 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha2Q91Y17 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha2Q91Y17 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
Pcdha2Q91Y17 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha2Q91Y17 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha2Q91Y17 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha2Q91Y17 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha2Q91Y17 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.14■□□□□ 0.49
Pcdha2Q91Y17 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.14■□□□□ 0.49
Pcdha2Q91Y17 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha2Q91Y17 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.14■□□□□ 0.49
Pcdha2Q91Y17 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha2Q91Y17 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha2Q91Y17 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha2Q91Y17 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha2Q91Y17 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Pcdha2Q91Y17 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha2Q91Y17 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha2Q91Y17 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha2Q91Y17 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Pcdha2Q91Y17 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha2Q91Y17 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pcdha2Q91Y17 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha2Q91Y17 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdha2Q91Y17 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha2Q91Y17 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha2Q91Y17 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha2Q91Y17 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha2Q91Y17 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdha2Q91Y17 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha2Q91Y17 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha2Q91Y17 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.13■□□□□ 0.49
Pcdha2Q91Y17 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha2Q91Y17 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha2Q91Y17 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha2Q91Y17 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pcdha2Q91Y17 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha2Q91Y17 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha2Q91Y17 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pcdha2Q91Y17 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.13■□□□□ 0.49
Pcdha2Q91Y17 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.13■□□□□ 0.49
Pcdha2Q91Y17 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pcdha2Q91Y17 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha2Q91Y17 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha2Q91Y17 Gm13186-201ENSMUST00000118031 316 ntBASIC18.12■□□□□ 0.49
Pcdha2Q91Y17 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha2Q91Y17 Gm22697-201ENSMUST00000175194 63 ntBASIC18.12■□□□□ 0.49
Pcdha2Q91Y17 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Pcdha2Q91Y17 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdha2Q91Y17 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha2Q91Y17 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha2Q91Y17 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.12■□□□□ 0.49
Pcdha2Q91Y17 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Pcdha2Q91Y17 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdha2Q91Y17 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha2Q91Y17 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha2Q91Y17 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha2Q91Y17 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdha2Q91Y17 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pcdha2Q91Y17 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha2Q91Y17 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha2Q91Y17 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha2Q91Y17 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha2Q91Y17 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.11■□□□□ 0.49
Pcdha2Q91Y17 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha2Q91Y17 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha2Q91Y17 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha2Q91Y17 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha2Q91Y17 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha2Q91Y17 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha2Q91Y17 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha2Q91Y17 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pcdha2Q91Y17 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha2Q91Y17 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms