Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb18Q91Y02 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb18Q91Y02 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb18Q91Y02 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb18Q91Y02 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb18Q91Y02 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb18Q91Y02 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb18Q91Y02 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb18Q91Y02 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.82■□□□□ 0.44
Pcdhb18Q91Y02 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.82■□□□□ 0.44
Pcdhb18Q91Y02 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb18Q91Y02 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb18Q91Y02 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb18Q91Y02 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb18Q91Y02 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb18Q91Y02 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb18Q91Y02 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 Gm10566-201ENSMUST00000086739 996 ntBASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb18Q91Y02 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb18Q91Y02 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb18Q91Y02 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhb18Q91Y02 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb18Q91Y02 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb18Q91Y02 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb18Q91Y02 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.8■□□□□ 0.44
Pcdhb18Q91Y02 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb18Q91Y02 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb18Q91Y02 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.8■□□□□ 0.44
Pcdhb18Q91Y02 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb18Q91Y02 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhb18Q91Y02 Gm17971-201ENSMUST00000190239 806 ntBASIC17.8■□□□□ 0.44
Pcdhb18Q91Y02 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb18Q91Y02 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb18Q91Y02 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb18Q91Y02 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb18Q91Y02 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb18Q91Y02 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb18Q91Y02 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb18Q91Y02 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhb18Q91Y02 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb18Q91Y02 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb18Q91Y02 Idnk-204ENSMUST00000226010 1898 ntBASIC17.8■□□□□ 0.44
Pcdhb18Q91Y02 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhb18Q91Y02 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb18Q91Y02 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb18Q91Y02 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb18Q91Y02 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb18Q91Y02 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb18Q91Y02 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb18Q91Y02 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhb18Q91Y02 Gm11950-201ENSMUST00000121615 838 ntBASIC17.79■□□□□ 0.44
Pcdhb18Q91Y02 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb18Q91Y02 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb18Q91Y02 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhb18Q91Y02 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb18Q91Y02 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhb18Q91Y02 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb18Q91Y02 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.79■□□□□ 0.44
Pcdhb18Q91Y02 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb18Q91Y02 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb18Q91Y02 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb18Q91Y02 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.78■□□□□ 0.44
Pcdhb18Q91Y02 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb18Q91Y02 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.78■□□□□ 0.44
Pcdhb18Q91Y02 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb18Q91Y02 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb18Q91Y02 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhb18Q91Y02 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb18Q91Y02 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb18Q91Y02 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb18Q91Y02 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Pcdhb18Q91Y02 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb18Q91Y02 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb18Q91Y02 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms