Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb6Q91XZ4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.52■□□□□ 0.4
Pcdhb6Q91XZ4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Pcdhb6Q91XZ4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb6Q91XZ4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb6Q91XZ4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb6Q91XZ4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Pcdhb6Q91XZ4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb6Q91XZ4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.52■□□□□ 0.39
Pcdhb6Q91XZ4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb6Q91XZ4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb6Q91XZ4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb6Q91XZ4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhb6Q91XZ4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb6Q91XZ4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb6Q91XZ4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb6Q91XZ4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhb6Q91XZ4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb6Q91XZ4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb6Q91XZ4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.51■□□□□ 0.39
Pcdhb6Q91XZ4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb6Q91XZ4 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.51■□□□□ 0.39
Pcdhb6Q91XZ4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb6Q91XZ4 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb6Q91XZ4 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb6Q91XZ4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb6Q91XZ4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb6Q91XZ4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb6Q91XZ4 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb6Q91XZ4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb6Q91XZ4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb6Q91XZ4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb6Q91XZ4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdhb6Q91XZ4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.5■□□□□ 0.39
Pcdhb6Q91XZ4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb6Q91XZ4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Pcdhb6Q91XZ4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Pcdhb6Q91XZ4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb6Q91XZ4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb6Q91XZ4 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Pcdhb6Q91XZ4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Pcdhb6Q91XZ4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Pcdhb6Q91XZ4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb6Q91XZ4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Pcdhb6Q91XZ4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb6Q91XZ4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb6Q91XZ4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb6Q91XZ4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb6Q91XZ4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.49■□□□□ 0.39
Pcdhb6Q91XZ4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb6Q91XZ4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb6Q91XZ4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.49■□□□□ 0.39
Pcdhb6Q91XZ4 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdhb6Q91XZ4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb6Q91XZ4 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb6Q91XZ4 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb6Q91XZ4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb6Q91XZ4 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.49■□□□□ 0.39
Pcdhb6Q91XZ4 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.49■□□□□ 0.39
Pcdhb6Q91XZ4 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb6Q91XZ4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb6Q91XZ4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb6Q91XZ4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb6Q91XZ4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb6Q91XZ4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb6Q91XZ4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb6Q91XZ4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Pcdhb6Q91XZ4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb6Q91XZ4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb6Q91XZ4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhb6Q91XZ4 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb6Q91XZ4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb6Q91XZ4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb6Q91XZ4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb6Q91XZ4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb6Q91XZ4 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Pcdhb6Q91XZ4 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.48■□□□□ 0.39
Pcdhb6Q91XZ4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb6Q91XZ4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb6Q91XZ4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhb6Q91XZ4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb6Q91XZ4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Pcdhb6Q91XZ4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb6Q91XZ4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb6Q91XZ4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb6Q91XZ4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhb6Q91XZ4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb6Q91XZ4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb6Q91XZ4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb6Q91XZ4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb6Q91XZ4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhb6Q91XZ4 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb6Q91XZ4 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.47■□□□□ 0.39
Pcdhb6Q91XZ4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.47■□□□□ 0.39
Pcdhb6Q91XZ4 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.47■□□□□ 0.39
Pcdhb6Q91XZ4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb6Q91XZ4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb6Q91XZ4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb6Q91XZ4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb6Q91XZ4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms