Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgb2Q91XX7 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgb2Q91XX7 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.05■□□□□ 0.16
Pcdhgb2Q91XX7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.05■□□□□ 0.16
Pcdhgb2Q91XX7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgb2Q91XX7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgb2Q91XX7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgb2Q91XX7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgb2Q91XX7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgb2Q91XX7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgb2Q91XX7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgb2Q91XX7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdhgb2Q91XX7 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgb2Q91XX7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgb2Q91XX7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdhgb2Q91XX7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb2Q91XX7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb2Q91XX7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb2Q91XX7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb2Q91XX7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb2Q91XX7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.04■□□□□ 0.16
Pcdhgb2Q91XX7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb2Q91XX7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Pcdhgb2Q91XX7 Rab3c-203ENSMUST00000224180 967 ntBASIC16.04■□□□□ 0.16
Pcdhgb2Q91XX7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb2Q91XX7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb2Q91XX7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb2Q91XX7 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb2Q91XX7 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.04■□□□□ 0.16
Pcdhgb2Q91XX7 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb2Q91XX7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Pcdhgb2Q91XX7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb2Q91XX7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb2Q91XX7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhgb2Q91XX7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb2Q91XX7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb2Q91XX7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb2Q91XX7 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb2Q91XX7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.03■□□□□ 0.16
Pcdhgb2Q91XX7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb2Q91XX7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb2Q91XX7 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhgb2Q91XX7 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb2Q91XX7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Pcdhgb2Q91XX7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb2Q91XX7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.03■□□□□ 0.16
Pcdhgb2Q91XX7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb2Q91XX7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.03■□□□□ 0.16
Pcdhgb2Q91XX7 Gm26524-201ENSMUST00000192339 390 ntBASIC16.03■□□□□ 0.16
Pcdhgb2Q91XX7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhgb2Q91XX7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb2Q91XX7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb2Q91XX7 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb2Q91XX7 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb2Q91XX7 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhgb2Q91XX7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhgb2Q91XX7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhgb2Q91XX7 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhgb2Q91XX7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgb2Q91XX7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgb2Q91XX7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgb2Q91XX7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Pcdhgb2Q91XX7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgb2Q91XX7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgb2Q91XX7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgb2Q91XX7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhgb2Q91XX7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhgb2Q91XX7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.02■□□□□ 0.15
Pcdhgb2Q91XX7 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Pcdhgb2Q91XX7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhgb2Q91XX7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhgb2Q91XX7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Pcdhgb2Q91XX7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Pcdhgb2Q91XX7 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb2Q91XX7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb2Q91XX7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb2Q91XX7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb2Q91XX7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb2Q91XX7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb2Q91XX7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb2Q91XX7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdhgb2Q91XX7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Pcdhgb2Q91XX7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb2Q91XX7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb2Q91XX7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb2Q91XX7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb2Q91XX7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb2Q91XX7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb2Q91XX7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb2Q91XX7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb2Q91XX7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdhgb2Q91XX7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhgb2Q91XX7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb2Q91XX7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb2Q91XX7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Pcdhgb2Q91XX7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16■□□□□ 0.15
Pcdhgb2Q91XX7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb2Q91XX7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb2Q91XX7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhgb2Q91XX7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms