Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb4Q91XX6 Gm12085-201ENSMUST00000119263 940 ntBASIC18.04■□□□□ 0.48
Pcdhgb4Q91XX6 Gm11434-201ENSMUST00000122379 629 ntBASIC18.04■□□□□ 0.48
Pcdhgb4Q91XX6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb4Q91XX6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhgb4Q91XX6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb4Q91XX6 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.04■□□□□ 0.48
Pcdhgb4Q91XX6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb4Q91XX6 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb4Q91XX6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb4Q91XX6 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb4Q91XX6 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb4Q91XX6 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb4Q91XX6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdhgb4Q91XX6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Pcdhgb4Q91XX6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb4Q91XX6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb4Q91XX6 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb4Q91XX6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb4Q91XX6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.03■□□□□ 0.48
Pcdhgb4Q91XX6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb4Q91XX6 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb4Q91XX6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb4Q91XX6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb4Q91XX6 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Pcdhgb4Q91XX6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhgb4Q91XX6 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb4Q91XX6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.03■□□□□ 0.48
Pcdhgb4Q91XX6 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb4Q91XX6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb4Q91XX6 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.03■□□□□ 0.48
Pcdhgb4Q91XX6 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb4Q91XX6 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb4Q91XX6 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb4Q91XX6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb4Q91XX6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb4Q91XX6 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb4Q91XX6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb4Q91XX6 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb4Q91XX6 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb4Q91XX6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb4Q91XX6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb4Q91XX6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Pcdhgb4Q91XX6 Gm45691-201ENSMUST00000206905 1120 ntBASIC18.02■□□□□ 0.48
Pcdhgb4Q91XX6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhgb4Q91XX6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
Pcdhgb4Q91XX6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhgb4Q91XX6 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Pcdhgb4Q91XX6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhgb4Q91XX6 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Pcdhgb4Q91XX6 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb4Q91XX6 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb4Q91XX6 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb4Q91XX6 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb4Q91XX6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb4Q91XX6 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb4Q91XX6 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb4Q91XX6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdhgb4Q91XX6 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb4Q91XX6 Mir1199-201ENSMUST00000117015 119 ntBASIC18.01■□□□□ 0.47
Pcdhgb4Q91XX6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb4Q91XX6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.01■□□□□ 0.47
Pcdhgb4Q91XX6 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Pcdhgb4Q91XX6 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhgb4Q91XX6 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb4Q91XX6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb4Q91XX6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb4Q91XX6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhgb4Q91XX6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb4Q91XX6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb4Q91XX6 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhgb4Q91XX6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb4Q91XX6 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb4Q91XX6 Gm26596-201ENSMUST00000180464 2655 ntBASIC18■□□□□ 0.47
Pcdhgb4Q91XX6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdhgb4Q91XX6 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb4Q91XX6 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb4Q91XX6 Gm27011-201ENSMUST00000182352 972 ntBASIC18■□□□□ 0.47
Pcdhgb4Q91XX6 AC073947.1-201ENSMUST00000216991 649 ntBASIC18■□□□□ 0.47
Pcdhgb4Q91XX6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb4Q91XX6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18■□□□□ 0.47
Pcdhgb4Q91XX6 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb4Q91XX6 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb4Q91XX6 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb4Q91XX6 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb4Q91XX6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb4Q91XX6 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb4Q91XX6 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdhgb4Q91XX6 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhgb4Q91XX6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb4Q91XX6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb4Q91XX6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb4Q91XX6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb4Q91XX6 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.99■□□□□ 0.47
Pcdhgb4Q91XX6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb4Q91XX6 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb4Q91XX6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.99■□□□□ 0.47
Pcdhgb4Q91XX6 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb4Q91XX6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb4Q91XX6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms