Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgc3Q91XX1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgc3Q91XX1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgc3Q91XX1 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Pcdhgc3Q91XX1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhgc3Q91XX1 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhgc3Q91XX1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhgc3Q91XX1 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgc3Q91XX1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdhgc3Q91XX1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgc3Q91XX1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhgc3Q91XX1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgc3Q91XX1 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgc3Q91XX1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgc3Q91XX1 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdhgc3Q91XX1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Pcdhgc3Q91XX1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.13■□□□□ 0.17
Pcdhgc3Q91XX1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.13■□□□□ 0.17
Pcdhgc3Q91XX1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.13■□□□□ 0.17
Pcdhgc3Q91XX1 Gm7514-201ENSMUST00000209475 934 ntBASIC16.13■□□□□ 0.17
Pcdhgc3Q91XX1 Gm10033-202ENSMUST00000211874 928 ntBASIC16.13■□□□□ 0.17
Pcdhgc3Q91XX1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgc3Q91XX1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdhgc3Q91XX1 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgc3Q91XX1 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhgc3Q91XX1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhgc3Q91XX1 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgc3Q91XX1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgc3Q91XX1 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgc3Q91XX1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgc3Q91XX1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhgc3Q91XX1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhgc3Q91XX1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgc3Q91XX1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgc3Q91XX1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhgc3Q91XX1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.12■□□□□ 0.17
Pcdhgc3Q91XX1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgc3Q91XX1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.12■□□□□ 0.17
Pcdhgc3Q91XX1 Gm11434-201ENSMUST00000122379 629 ntBASIC16.12■□□□□ 0.17
Pcdhgc3Q91XX1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgc3Q91XX1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.12■□□□□ 0.17
Pcdhgc3Q91XX1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgc3Q91XX1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhgc3Q91XX1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgc3Q91XX1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgc3Q91XX1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgc3Q91XX1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgc3Q91XX1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc3Q91XX1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc3Q91XX1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc3Q91XX1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc3Q91XX1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.11■□□□□ 0.17
Pcdhgc3Q91XX1 Gm13323-201ENSMUST00000120245 1151 ntBASIC16.11■□□□□ 0.17
Pcdhgc3Q91XX1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.11■□□□□ 0.17
Pcdhgc3Q91XX1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc3Q91XX1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc3Q91XX1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhgc3Q91XX1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc3Q91XX1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhgc3Q91XX1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc3Q91XX1 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc3Q91XX1 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.11■□□□□ 0.17
Pcdhgc3Q91XX1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc3Q91XX1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc3Q91XX1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhgc3Q91XX1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc3Q91XX1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc3Q91XX1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc3Q91XX1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc3Q91XX1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.1■□□□□ 0.17
Pcdhgc3Q91XX1 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhgc3Q91XX1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhgc3Q91XX1 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc3Q91XX1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Pcdhgc3Q91XX1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhgc3Q91XX1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Pcdhgc3Q91XX1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc3Q91XX1 Gm42569-201ENSMUST00000200539 472 ntBASIC16.1■□□□□ 0.17
Pcdhgc3Q91XX1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc3Q91XX1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc3Q91XX1 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc3Q91XX1 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc3Q91XX1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc3Q91XX1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc3Q91XX1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc3Q91XX1 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc3Q91XX1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc3Q91XX1 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc3Q91XX1 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc3Q91XX1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc3Q91XX1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc3Q91XX1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc3Q91XX1 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc3Q91XX1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhgc3Q91XX1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc3Q91XX1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc3Q91XX1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc3Q91XX1 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhgc3Q91XX1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhgc3Q91XX1 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms