Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgc5Q91XW9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgc5Q91XW9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgc5Q91XW9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.4■□□□□ 0.7
Pcdhgc5Q91XW9 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.4■□□□□ 0.7
Pcdhgc5Q91XW9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgc5Q91XW9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgc5Q91XW9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.4■□□□□ 0.7
Pcdhgc5Q91XW9 Gm13401-201ENSMUST00000117074 291 ntBASIC19.4■□□□□ 0.7
Pcdhgc5Q91XW9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgc5Q91XW9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgc5Q91XW9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgc5Q91XW9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgc5Q91XW9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgc5Q91XW9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgc5Q91XW9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgc5Q91XW9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhgc5Q91XW9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
Pcdhgc5Q91XW9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgc5Q91XW9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhgc5Q91XW9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhgc5Q91XW9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgc5Q91XW9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgc5Q91XW9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgc5Q91XW9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgc5Q91XW9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgc5Q91XW9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgc5Q91XW9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgc5Q91XW9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgc5Q91XW9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgc5Q91XW9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgc5Q91XW9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Pcdhgc5Q91XW9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.39■□□□□ 0.69
Pcdhgc5Q91XW9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgc5Q91XW9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Pcdhgc5Q91XW9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgc5Q91XW9 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.38■□□□□ 0.69
Pcdhgc5Q91XW9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgc5Q91XW9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.38■□□□□ 0.69
Pcdhgc5Q91XW9 Gm13474-201ENSMUST00000122466 815 ntBASIC19.38■□□□□ 0.69
Pcdhgc5Q91XW9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgc5Q91XW9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.38■□□□□ 0.69
Pcdhgc5Q91XW9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgc5Q91XW9 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.38■□□□□ 0.69
Pcdhgc5Q91XW9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.38■□□□□ 0.69
Pcdhgc5Q91XW9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgc5Q91XW9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgc5Q91XW9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgc5Q91XW9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgc5Q91XW9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgc5Q91XW9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgc5Q91XW9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdhgc5Q91XW9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgc5Q91XW9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgc5Q91XW9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgc5Q91XW9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgc5Q91XW9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pcdhgc5Q91XW9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgc5Q91XW9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgc5Q91XW9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgc5Q91XW9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Pcdhgc5Q91XW9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgc5Q91XW9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgc5Q91XW9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.37■□□□□ 0.69
Pcdhgc5Q91XW9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgc5Q91XW9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgc5Q91XW9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgc5Q91XW9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgc5Q91XW9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgc5Q91XW9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Pcdhgc5Q91XW9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgc5Q91XW9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgc5Q91XW9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgc5Q91XW9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgc5Q91XW9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgc5Q91XW9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgc5Q91XW9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.36■□□□□ 0.69
Pcdhgc5Q91XW9 Gm18669-201ENSMUST00000216049 778 ntBASIC19.36■□□□□ 0.69
Pcdhgc5Q91XW9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pcdhgc5Q91XW9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pcdhgc5Q91XW9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgc5Q91XW9 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.36■□□□□ 0.69
Pcdhgc5Q91XW9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgc5Q91XW9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgc5Q91XW9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgc5Q91XW9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgc5Q91XW9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgc5Q91XW9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgc5Q91XW9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgc5Q91XW9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgc5Q91XW9 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.35■□□□□ 0.69
Pcdhgc5Q91XW9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Pcdhgc5Q91XW9 Gm9013-201ENSMUST00000132939 882 ntBASIC19.35■□□□□ 0.69
Pcdhgc5Q91XW9 Gm8969-201ENSMUST00000199694 526 ntBASIC19.35■□□□□ 0.69
Pcdhgc5Q91XW9 Gm7213-201ENSMUST00000215977 950 ntBASIC19.35■□□□□ 0.69
Pcdhgc5Q91XW9 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgc5Q91XW9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pcdhgc5Q91XW9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Pcdhgc5Q91XW9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgc5Q91XW9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms