Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lims2Q91XD2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lims2Q91XD2 AA414768-201ENSMUST00000121924 1257 ntBASIC17.45■□□□□ 0.38
Lims2Q91XD2 Gm6345-202ENSMUST00000180900 204 ntBASIC17.45■□□□□ 0.38
Lims2Q91XD2 Gm37722-201ENSMUST00000193757 208 ntBASIC17.45■□□□□ 0.38
Lims2Q91XD2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lims2Q91XD2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lims2Q91XD2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lims2Q91XD2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lims2Q91XD2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Lims2Q91XD2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lims2Q91XD2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lims2Q91XD2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lims2Q91XD2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lims2Q91XD2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Lims2Q91XD2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.44■□□□□ 0.38
Lims2Q91XD2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.44■□□□□ 0.38
Lims2Q91XD2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lims2Q91XD2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lims2Q91XD2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lims2Q91XD2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lims2Q91XD2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lims2Q91XD2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lims2Q91XD2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.44■□□□□ 0.38
Lims2Q91XD2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lims2Q91XD2 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.43■□□□□ 0.38
Lims2Q91XD2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lims2Q91XD2 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.43■□□□□ 0.38
Lims2Q91XD2 Gm25016-201ENSMUST00000158399 131 ntBASIC17.43■□□□□ 0.38
Lims2Q91XD2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Lims2Q91XD2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lims2Q91XD2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lims2Q91XD2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lims2Q91XD2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lims2Q91XD2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lims2Q91XD2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lims2Q91XD2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lims2Q91XD2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lims2Q91XD2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Lims2Q91XD2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lims2Q91XD2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lims2Q91XD2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lims2Q91XD2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lims2Q91XD2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lims2Q91XD2 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.42■□□□□ 0.38
Lims2Q91XD2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lims2Q91XD2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lims2Q91XD2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lims2Q91XD2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.42■□□□□ 0.38
Lims2Q91XD2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lims2Q91XD2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lims2Q91XD2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lims2Q91XD2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Lims2Q91XD2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Lims2Q91XD2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lims2Q91XD2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lims2Q91XD2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Lims2Q91XD2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Lims2Q91XD2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lims2Q91XD2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lims2Q91XD2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.42■□□□□ 0.38
Lims2Q91XD2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lims2Q91XD2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lims2Q91XD2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Lims2Q91XD2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lims2Q91XD2 Gm11336-201ENSMUST00000118168 334 ntBASIC17.41■□□□□ 0.38
Lims2Q91XD2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Lims2Q91XD2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lims2Q91XD2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.41■□□□□ 0.38
Lims2Q91XD2 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.41■□□□□ 0.38
Lims2Q91XD2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lims2Q91XD2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lims2Q91XD2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lims2Q91XD2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lims2Q91XD2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.41■□□□□ 0.38
Lims2Q91XD2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lims2Q91XD2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Lims2Q91XD2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lims2Q91XD2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lims2Q91XD2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lims2Q91XD2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lims2Q91XD2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Lims2Q91XD2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lims2Q91XD2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lims2Q91XD2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Lims2Q91XD2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lims2Q91XD2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.4■□□□□ 0.38
Lims2Q91XD2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.4■□□□□ 0.38
Lims2Q91XD2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lims2Q91XD2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lims2Q91XD2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lims2Q91XD2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lims2Q91XD2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lims2Q91XD2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lims2Q91XD2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lims2Q91XD2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Lims2Q91XD2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lims2Q91XD2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lims2Q91XD2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Lims2Q91XD2 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms