Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx41Q91VN6 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx41Q91VN6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx41Q91VN6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx41Q91VN6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx41Q91VN6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.54■□□□□ 0.72
Ddx41Q91VN6 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.54■□□□□ 0.72
Ddx41Q91VN6 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx41Q91VN6 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx41Q91VN6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx41Q91VN6 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.54■□□□□ 0.72
Ddx41Q91VN6 Gm8969-201ENSMUST00000199694 526 ntBASIC19.54■□□□□ 0.72
Ddx41Q91VN6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx41Q91VN6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ddx41Q91VN6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.54■□□□□ 0.72
Ddx41Q91VN6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.54■□□□□ 0.72
Ddx41Q91VN6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ddx41Q91VN6 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ddx41Q91VN6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx41Q91VN6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.54■□□□□ 0.72
Ddx41Q91VN6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx41Q91VN6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx41Q91VN6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Ddx41Q91VN6 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx41Q91VN6 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ddx41Q91VN6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx41Q91VN6 Haglr-201ENSMUST00000100000 2085 ntBASIC19.53■□□□□ 0.72
Ddx41Q91VN6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx41Q91VN6 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx41Q91VN6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx41Q91VN6 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Ddx41Q91VN6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx41Q91VN6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx41Q91VN6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ddx41Q91VN6 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx41Q91VN6 Gm7638-201ENSMUST00000121348 967 ntBASIC19.53■□□□□ 0.72
Ddx41Q91VN6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.53■□□□□ 0.72
Ddx41Q91VN6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.53■□□□□ 0.72
Ddx41Q91VN6 Mir5130-201ENSMUST00000175160 84 ntBASIC19.53■□□□□ 0.72
Ddx41Q91VN6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Ddx41Q91VN6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.53■□□□□ 0.72
Ddx41Q91VN6 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.53■□□□□ 0.72
Ddx41Q91VN6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx41Q91VN6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx41Q91VN6 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.53■□□□□ 0.72
Ddx41Q91VN6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ddx41Q91VN6 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx41Q91VN6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx41Q91VN6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx41Q91VN6 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx41Q91VN6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx41Q91VN6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx41Q91VN6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Ddx41Q91VN6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx41Q91VN6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx41Q91VN6 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.52■□□□□ 0.72
Ddx41Q91VN6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Ddx41Q91VN6 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx41Q91VN6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ddx41Q91VN6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ddx41Q91VN6 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Ddx41Q91VN6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Ddx41Q91VN6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx41Q91VN6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx41Q91VN6 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx41Q91VN6 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Ddx41Q91VN6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx41Q91VN6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx41Q91VN6 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ddx41Q91VN6 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx41Q91VN6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Ddx41Q91VN6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx41Q91VN6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Ddx41Q91VN6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx41Q91VN6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx41Q91VN6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx41Q91VN6 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx41Q91VN6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx41Q91VN6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx41Q91VN6 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx41Q91VN6 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx41Q91VN6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx41Q91VN6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx41Q91VN6 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx41Q91VN6 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx41Q91VN6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx41Q91VN6 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.5■□□□□ 0.71
Ddx41Q91VN6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.5■□□□□ 0.71
Ddx41Q91VN6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.5■□□□□ 0.71
Ddx41Q91VN6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx41Q91VN6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ddx41Q91VN6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx41Q91VN6 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.5■□□□□ 0.71
Ddx41Q91VN6 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx41Q91VN6 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Ddx41Q91VN6 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx41Q91VN6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx41Q91VN6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx41Q91VN6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx41Q91VN6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms