Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tram1Q91V04 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Tram1Q91V04 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Tram1Q91V04 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.72□□□□□ -0.05
Tram1Q91V04 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Tram1Q91V04 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tram1Q91V04 Gm38285-201ENSMUST00000192928 922 ntBASIC14.72□□□□□ -0.05
Tram1Q91V04 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Tram1Q91V04 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.72□□□□□ -0.05
Tram1Q91V04 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Tram1Q91V04 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tram1Q91V04 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tram1Q91V04 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tram1Q91V04 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Tram1Q91V04 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tram1Q91V04 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tram1Q91V04 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tram1Q91V04 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tram1Q91V04 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tram1Q91V04 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tram1Q91V04 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Tram1Q91V04 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tram1Q91V04 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tram1Q91V04 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.71□□□□□ -0.05
Tram1Q91V04 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tram1Q91V04 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tram1Q91V04 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tram1Q91V04 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Tram1Q91V04 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tram1Q91V04 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Tram1Q91V04 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Tram1Q91V04 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tram1Q91V04 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Tram1Q91V04 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.71□□□□□ -0.05
Tram1Q91V04 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tram1Q91V04 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Tram1Q91V04 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Tram1Q91V04 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Tram1Q91V04 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Tram1Q91V04 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Tram1Q91V04 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Tram1Q91V04 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Tram1Q91V04 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.71□□□□□ -0.06
Tram1Q91V04 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.06
Tram1Q91V04 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tram1Q91V04 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Tram1Q91V04 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tram1Q91V04 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tram1Q91V04 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tram1Q91V04 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Tram1Q91V04 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Tram1Q91V04 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tram1Q91V04 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tram1Q91V04 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.7□□□□□ -0.06
Tram1Q91V04 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.7□□□□□ -0.06
Tram1Q91V04 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.7□□□□□ -0.06
Tram1Q91V04 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Tram1Q91V04 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tram1Q91V04 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tram1Q91V04 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tram1Q91V04 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tram1Q91V04 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Tram1Q91V04 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tram1Q91V04 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tram1Q91V04 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tram1Q91V04 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
Tram1Q91V04 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tram1Q91V04 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tram1Q91V04 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tram1Q91V04 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tram1Q91V04 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Tram1Q91V04 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tram1Q91V04 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tram1Q91V04 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Tram1Q91V04 Gm27454-201ENSMUST00000185090 204 ntBASIC14.69□□□□□ -0.06
Tram1Q91V04 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.69□□□□□ -0.06
Tram1Q91V04 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Tram1Q91V04 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tram1Q91V04 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Tram1Q91V04 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tram1Q91V04 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Tram1Q91V04 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Tram1Q91V04 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tram1Q91V04 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tram1Q91V04 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tram1Q91V04 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tram1Q91V04 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tram1Q91V04 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tram1Q91V04 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tram1Q91V04 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tram1Q91V04 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tram1Q91V04 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tram1Q91V04 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tram1Q91V04 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tram1Q91V04 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tram1Q91V04 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tram1Q91V04 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Tram1Q91V04 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.68□□□□□ -0.06
Tram1Q91V04 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tram1Q91V04 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms