Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TraipQ8VIG6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TraipQ8VIG6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TraipQ8VIG6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
TraipQ8VIG6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TraipQ8VIG6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TraipQ8VIG6 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.14■□□□□ 0.49
TraipQ8VIG6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TraipQ8VIG6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TraipQ8VIG6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TraipQ8VIG6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TraipQ8VIG6 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TraipQ8VIG6 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.14■□□□□ 0.49
TraipQ8VIG6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TraipQ8VIG6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TraipQ8VIG6 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TraipQ8VIG6 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TraipQ8VIG6 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.14■□□□□ 0.49
TraipQ8VIG6 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TraipQ8VIG6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TraipQ8VIG6 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TraipQ8VIG6 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.13■□□□□ 0.49
TraipQ8VIG6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TraipQ8VIG6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TraipQ8VIG6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TraipQ8VIG6 Gm11336-201ENSMUST00000118168 334 ntBASIC18.13■□□□□ 0.49
TraipQ8VIG6 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TraipQ8VIG6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TraipQ8VIG6 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TraipQ8VIG6 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.13■□□□□ 0.49
TraipQ8VIG6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TraipQ8VIG6 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TraipQ8VIG6 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TraipQ8VIG6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TraipQ8VIG6 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TraipQ8VIG6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TraipQ8VIG6 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TraipQ8VIG6 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TraipQ8VIG6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TraipQ8VIG6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TraipQ8VIG6 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
TraipQ8VIG6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TraipQ8VIG6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TraipQ8VIG6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TraipQ8VIG6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TraipQ8VIG6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TraipQ8VIG6 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TraipQ8VIG6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TraipQ8VIG6 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TraipQ8VIG6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TraipQ8VIG6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TraipQ8VIG6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TraipQ8VIG6 Gm27742-201ENSMUST00000184667 60 ntBASIC18.12■□□□□ 0.49
TraipQ8VIG6 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.12■□□□□ 0.49
TraipQ8VIG6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
TraipQ8VIG6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.12■□□□□ 0.49
TraipQ8VIG6 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TraipQ8VIG6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TraipQ8VIG6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TraipQ8VIG6 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TraipQ8VIG6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TraipQ8VIG6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TraipQ8VIG6 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TraipQ8VIG6 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TraipQ8VIG6 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TraipQ8VIG6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TraipQ8VIG6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TraipQ8VIG6 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TraipQ8VIG6 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TraipQ8VIG6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TraipQ8VIG6 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TraipQ8VIG6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TraipQ8VIG6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TraipQ8VIG6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TraipQ8VIG6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TraipQ8VIG6 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TraipQ8VIG6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TraipQ8VIG6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TraipQ8VIG6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TraipQ8VIG6 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.1■□□□□ 0.49
TraipQ8VIG6 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.1■□□□□ 0.49
TraipQ8VIG6 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TraipQ8VIG6 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
TraipQ8VIG6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.1■□□□□ 0.49
TraipQ8VIG6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TraipQ8VIG6 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TraipQ8VIG6 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TraipQ8VIG6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.09■□□□□ 0.49
TraipQ8VIG6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TraipQ8VIG6 Gm17807-201ENSMUST00000186869 298 ntBASIC18.09■□□□□ 0.49
TraipQ8VIG6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.09■□□□□ 0.49
TraipQ8VIG6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TraipQ8VIG6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TraipQ8VIG6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TraipQ8VIG6 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TraipQ8VIG6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TraipQ8VIG6 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TraipQ8VIG6 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TraipQ8VIG6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.09■□□□□ 0.49
TraipQ8VIG6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms