Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh18Q8VHR0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdh18Q8VHR0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdh18Q8VHR0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh18Q8VHR0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh18Q8VHR0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdh18Q8VHR0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdh18Q8VHR0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh18Q8VHR0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh18Q8VHR0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdh18Q8VHR0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh18Q8VHR0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh18Q8VHR0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Gm27405-201ENSMUST00000184201 112 ntBASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pcdh18Q8VHR0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh18Q8VHR0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh18Q8VHR0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdh18Q8VHR0 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh18Q8VHR0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh18Q8VHR0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh18Q8VHR0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh18Q8VHR0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh18Q8VHR0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdh18Q8VHR0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh18Q8VHR0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Pcdh18Q8VHR0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh18Q8VHR0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh18Q8VHR0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.42■□□□□ 0.22
Pcdh18Q8VHR0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.42■□□□□ 0.22
Pcdh18Q8VHR0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh18Q8VHR0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh18Q8VHR0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh18Q8VHR0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Pcdh18Q8VHR0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh18Q8VHR0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh18Q8VHR0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh18Q8VHR0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh18Q8VHR0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh18Q8VHR0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh18Q8VHR0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh18Q8VHR0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh18Q8VHR0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh18Q8VHR0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh18Q8VHR0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdh18Q8VHR0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.41■□□□□ 0.22
Pcdh18Q8VHR0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh18Q8VHR0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh18Q8VHR0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms