Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40bQ8VHP8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40bQ8VHP8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40bQ8VHP8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40bQ8VHP8 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40bQ8VHP8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40bQ8VHP8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.37■□□□□ 0.05
Rab40bQ8VHP8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.37■□□□□ 0.05
Rab40bQ8VHP8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40bQ8VHP8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40bQ8VHP8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40bQ8VHP8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40bQ8VHP8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40bQ8VHP8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40bQ8VHP8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.36■□□□□ 0.05
Rab40bQ8VHP8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40bQ8VHP8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Rab40bQ8VHP8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40bQ8VHP8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.36■□□□□ 0.05
Rab40bQ8VHP8 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40bQ8VHP8 Mir6349-201ENSMUST00000184059 97 ntBASIC15.36■□□□□ 0.05
Rab40bQ8VHP8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Rab40bQ8VHP8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40bQ8VHP8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40bQ8VHP8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.36■□□□□ 0.05
Rab40bQ8VHP8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40bQ8VHP8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40bQ8VHP8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40bQ8VHP8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Rab40bQ8VHP8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Rab40bQ8VHP8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40bQ8VHP8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40bQ8VHP8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Rab40bQ8VHP8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab40bQ8VHP8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab40bQ8VHP8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab40bQ8VHP8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.35■□□□□ 0.05
Rab40bQ8VHP8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rab40bQ8VHP8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.35■□□□□ 0.05
Rab40bQ8VHP8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab40bQ8VHP8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rab40bQ8VHP8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab40bQ8VHP8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Rab40bQ8VHP8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab40bQ8VHP8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab40bQ8VHP8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.35■□□□□ 0.05
Rab40bQ8VHP8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab40bQ8VHP8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.35■□□□□ 0.05
Rab40bQ8VHP8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab40bQ8VHP8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab40bQ8VHP8 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab40bQ8VHP8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab40bQ8VHP8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40bQ8VHP8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40bQ8VHP8 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40bQ8VHP8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40bQ8VHP8 Gm11927-201ENSMUST00000118472 759 ntBASIC15.34■□□□□ 0.05
Rab40bQ8VHP8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40bQ8VHP8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.34■□□□□ 0.05
Rab40bQ8VHP8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40bQ8VHP8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40bQ8VHP8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40bQ8VHP8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40bQ8VHP8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40bQ8VHP8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40bQ8VHP8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40bQ8VHP8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rab40bQ8VHP8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40bQ8VHP8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40bQ8VHP8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40bQ8VHP8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40bQ8VHP8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40bQ8VHP8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rab40bQ8VHP8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rab40bQ8VHP8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rab40bQ8VHP8 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab40bQ8VHP8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab40bQ8VHP8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab40bQ8VHP8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Rab40bQ8VHP8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab40bQ8VHP8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rab40bQ8VHP8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.33■□□□□ 0.04
Rab40bQ8VHP8 Gm42642-201ENSMUST00000200683 355 ntBASIC15.33■□□□□ 0.04
Rab40bQ8VHP8 AV356131-201ENSMUST00000206201 750 ntBASIC15.33■□□□□ 0.04
Rab40bQ8VHP8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.33■□□□□ 0.04
Rab40bQ8VHP8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab40bQ8VHP8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab40bQ8VHP8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.33■□□□□ 0.04
Rab40bQ8VHP8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab40bQ8VHP8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab40bQ8VHP8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab40bQ8VHP8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab40bQ8VHP8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab40bQ8VHP8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Rab40bQ8VHP8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab40bQ8VHP8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms