Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpap2Q8VC34 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rpap2Q8VC34 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpap2Q8VC34 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpap2Q8VC34 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpap2Q8VC34 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rpap2Q8VC34 Gm27000-201ENSMUST00000182943 842 ntBASIC18.72■□□□□ 0.59
Rpap2Q8VC34 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rpap2Q8VC34 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Rpap2Q8VC34 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.72■□□□□ 0.59
Rpap2Q8VC34 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpap2Q8VC34 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpap2Q8VC34 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Rpap2Q8VC34 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rpap2Q8VC34 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Rpap2Q8VC34 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpap2Q8VC34 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.71■□□□□ 0.59
Rpap2Q8VC34 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpap2Q8VC34 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpap2Q8VC34 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpap2Q8VC34 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rpap2Q8VC34 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.71■□□□□ 0.59
Rpap2Q8VC34 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpap2Q8VC34 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpap2Q8VC34 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.71■□□□□ 0.59
Rpap2Q8VC34 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rpap2Q8VC34 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpap2Q8VC34 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rpap2Q8VC34 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpap2Q8VC34 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Rpap2Q8VC34 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rpap2Q8VC34 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Rpap2Q8VC34 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpap2Q8VC34 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpap2Q8VC34 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpap2Q8VC34 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpap2Q8VC34 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpap2Q8VC34 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Rpap2Q8VC34 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpap2Q8VC34 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rpap2Q8VC34 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rpap2Q8VC34 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.7■□□□□ 0.58
Rpap2Q8VC34 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.7■□□□□ 0.58
Rpap2Q8VC34 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Rpap2Q8VC34 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpap2Q8VC34 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Rpap2Q8VC34 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpap2Q8VC34 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpap2Q8VC34 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpap2Q8VC34 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpap2Q8VC34 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpap2Q8VC34 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpap2Q8VC34 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpap2Q8VC34 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpap2Q8VC34 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.69■□□□□ 0.58
Rpap2Q8VC34 Gm11539-201ENSMUST00000119837 557 ntBASIC18.69■□□□□ 0.58
Rpap2Q8VC34 Gm13436-201ENSMUST00000120418 567 ntBASIC18.69■□□□□ 0.58
Rpap2Q8VC34 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.69■□□□□ 0.58
Rpap2Q8VC34 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.69■□□□□ 0.58
Rpap2Q8VC34 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Rpap2Q8VC34 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpap2Q8VC34 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpap2Q8VC34 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Rpap2Q8VC34 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rpap2Q8VC34 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Rpap2Q8VC34 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpap2Q8VC34 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpap2Q8VC34 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpap2Q8VC34 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpap2Q8VC34 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.68■□□□□ 0.58
Rpap2Q8VC34 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.68■□□□□ 0.58
Rpap2Q8VC34 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpap2Q8VC34 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpap2Q8VC34 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rpap2Q8VC34 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rpap2Q8VC34 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rpap2Q8VC34 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpap2Q8VC34 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpap2Q8VC34 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpap2Q8VC34 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpap2Q8VC34 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Rpap2Q8VC34 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rpap2Q8VC34 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rpap2Q8VC34 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpap2Q8VC34 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpap2Q8VC34 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.67■□□□□ 0.58
Rpap2Q8VC34 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rpap2Q8VC34 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.67■□□□□ 0.58
Rpap2Q8VC34 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Rpap2Q8VC34 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rpap2Q8VC34 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpap2Q8VC34 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.67■□□□□ 0.58
Rpap2Q8VC34 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpap2Q8VC34 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.67■□□□□ 0.58
Rpap2Q8VC34 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpap2Q8VC34 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpap2Q8VC34 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.66■□□□□ 0.58
Rpap2Q8VC34 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.66■□□□□ 0.58
Rpap2Q8VC34 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpap2Q8VC34 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms