Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.6■□□□□ 0.41
Sh3kbp1Q8R550 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3kbp1Q8R550 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3kbp1Q8R550 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3kbp1Q8R550 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Sh3kbp1Q8R550 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Sh3kbp1Q8R550 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.59■□□□□ 0.41
Sh3kbp1Q8R550 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3kbp1Q8R550 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.59■□□□□ 0.41
Sh3kbp1Q8R550 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.59■□□□□ 0.41
Sh3kbp1Q8R550 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Sh3kbp1Q8R550 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3kbp1Q8R550 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3kbp1Q8R550 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3kbp1Q8R550 Gm18032-201ENSMUST00000222541 538 ntBASIC17.59■□□□□ 0.41
Sh3kbp1Q8R550 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.59■□□□□ 0.41
Sh3kbp1Q8R550 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3kbp1Q8R550 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3kbp1Q8R550 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3kbp1Q8R550 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3kbp1Q8R550 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3kbp1Q8R550 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3kbp1Q8R550 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3kbp1Q8R550 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sh3kbp1Q8R550 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sh3kbp1Q8R550 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.58■□□□□ 0.41
Sh3kbp1Q8R550 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sh3kbp1Q8R550 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sh3kbp1Q8R550 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
Sh3kbp1Q8R550 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Sh3kbp1Q8R550 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3kbp1Q8R550 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3kbp1Q8R550 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Sh3kbp1Q8R550 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3kbp1Q8R550 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3kbp1Q8R550 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.58■□□□□ 0.4
Sh3kbp1Q8R550 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3kbp1Q8R550 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3kbp1Q8R550 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Sh3kbp1Q8R550 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3kbp1Q8R550 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3kbp1Q8R550 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3kbp1Q8R550 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3kbp1Q8R550 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Sh3kbp1Q8R550 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3kbp1Q8R550 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Sh3kbp1Q8R550 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.57■□□□□ 0.4
Sh3kbp1Q8R550 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3kbp1Q8R550 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3kbp1Q8R550 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.57■□□□□ 0.4
Sh3kbp1Q8R550 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3kbp1Q8R550 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.57■□□□□ 0.4
Sh3kbp1Q8R550 Gm23634-201ENSMUST00000175071 91 ntBASIC17.57■□□□□ 0.4
Sh3kbp1Q8R550 Gm7367-201ENSMUST00000057611 492 ntBASIC17.57■□□□□ 0.4
Sh3kbp1Q8R550 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3kbp1Q8R550 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Sh3kbp1Q8R550 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Sh3kbp1Q8R550 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.57■□□□□ 0.4
Sh3kbp1Q8R550 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3kbp1Q8R550 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3kbp1Q8R550 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3kbp1Q8R550 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3kbp1Q8R550 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3kbp1Q8R550 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3kbp1Q8R550 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3kbp1Q8R550 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.56■□□□□ 0.4
Sh3kbp1Q8R550 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3kbp1Q8R550 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Sh3kbp1Q8R550 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3kbp1Q8R550 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3kbp1Q8R550 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3kbp1Q8R550 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.56■□□□□ 0.4
Sh3kbp1Q8R550 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.56■□□□□ 0.4
Sh3kbp1Q8R550 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3kbp1Q8R550 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3kbp1Q8R550 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3kbp1Q8R550 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3kbp1Q8R550 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3kbp1Q8R550 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3kbp1Q8R550 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3kbp1Q8R550 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3kbp1Q8R550 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3kbp1Q8R550 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3kbp1Q8R550 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3kbp1Q8R550 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3kbp1Q8R550 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Sh3kbp1Q8R550 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3kbp1Q8R550 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3kbp1Q8R550 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3kbp1Q8R550 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3kbp1Q8R550 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3kbp1Q8R550 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Sh3kbp1Q8R550 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3kbp1Q8R550 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3kbp1Q8R550 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3kbp1Q8R550 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3kbp1Q8R550 Mir5130-201ENSMUST00000175160 84 ntBASIC17.55■□□□□ 0.4
Sh3kbp1Q8R550 Gm2274-201ENSMUST00000184539 609 ntBASIC17.55■□□□□ 0.4
Sh3kbp1Q8R550 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3kbp1Q8R550 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms