Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.27■□□□□ 0.52
Nup58Q8R332 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.27■□□□□ 0.52
Nup58Q8R332 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup58Q8R332 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup58Q8R332 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Nup58Q8R332 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Nup58Q8R332 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.27■□□□□ 0.52
Nup58Q8R332 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup58Q8R332 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nup58Q8R332 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nup58Q8R332 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nup58Q8R332 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nup58Q8R332 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nup58Q8R332 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nup58Q8R332 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Nup58Q8R332 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.26■□□□□ 0.51
Nup58Q8R332 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup58Q8R332 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.26■□□□□ 0.51
Nup58Q8R332 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.26■□□□□ 0.51
Nup58Q8R332 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.26■□□□□ 0.51
Nup58Q8R332 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nup58Q8R332 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup58Q8R332 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup58Q8R332 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup58Q8R332 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nup58Q8R332 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Nup58Q8R332 Gm10138-203ENSMUST00000206952 366 ntBASIC18.26■□□□□ 0.51
Nup58Q8R332 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup58Q8R332 Mtag2-201ENSMUST00000058665 714 ntBASIC18.26■□□□□ 0.51
Nup58Q8R332 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup58Q8R332 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup58Q8R332 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.26■□□□□ 0.51
Nup58Q8R332 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Nup58Q8R332 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup58Q8R332 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup58Q8R332 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup58Q8R332 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup58Q8R332 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup58Q8R332 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup58Q8R332 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.25■□□□□ 0.51
Nup58Q8R332 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Nup58Q8R332 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Nup58Q8R332 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nup58Q8R332 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nup58Q8R332 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Nup58Q8R332 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Nup58Q8R332 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup58Q8R332 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.24■□□□□ 0.51
Nup58Q8R332 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup58Q8R332 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup58Q8R332 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup58Q8R332 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup58Q8R332 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.24■□□□□ 0.51
Nup58Q8R332 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup58Q8R332 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup58Q8R332 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nup58Q8R332 Gm18666-201ENSMUST00000190039 958 ntBASIC18.24■□□□□ 0.51
Nup58Q8R332 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.24■□□□□ 0.51
Nup58Q8R332 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.24■□□□□ 0.51
Nup58Q8R332 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup58Q8R332 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup58Q8R332 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup58Q8R332 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nup58Q8R332 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nup58Q8R332 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup58Q8R332 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup58Q8R332 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nup58Q8R332 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup58Q8R332 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
Nup58Q8R332 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Nup58Q8R332 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Nup58Q8R332 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.23■□□□□ 0.51
Nup58Q8R332 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.23■□□□□ 0.51
Nup58Q8R332 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Nup58Q8R332 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.23■□□□□ 0.51
Nup58Q8R332 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup58Q8R332 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.23■□□□□ 0.51
Nup58Q8R332 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Nup58Q8R332 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Nup58Q8R332 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup58Q8R332 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup58Q8R332 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup58Q8R332 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup58Q8R332 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup58Q8R332 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup58Q8R332 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup58Q8R332 Gm11249-201ENSMUST00000117071 859 ntBASIC18.22■□□□□ 0.51
Nup58Q8R332 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup58Q8R332 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Nup58Q8R332 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup58Q8R332 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup58Q8R332 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup58Q8R332 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Nup58Q8R332 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup58Q8R332 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nup58Q8R332 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup58Q8R332 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Nup58Q8R332 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Nup58Q8R332 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup58Q8R332 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms