Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Chmp7Q8R1T1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Chmp7Q8R1T1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Chmp7Q8R1T1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp7Q8R1T1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp7Q8R1T1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp7Q8R1T1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp7Q8R1T1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp7Q8R1T1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp7Q8R1T1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Chmp7Q8R1T1 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Chmp7Q8R1T1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp7Q8R1T1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Chmp7Q8R1T1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp7Q8R1T1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp7Q8R1T1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp7Q8R1T1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp7Q8R1T1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp7Q8R1T1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp7Q8R1T1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp7Q8R1T1 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp7Q8R1T1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp7Q8R1T1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Chmp7Q8R1T1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp7Q8R1T1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp7Q8R1T1 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp7Q8R1T1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp7Q8R1T1 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp7Q8R1T1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.8■■□□□ 1.08
Chmp7Q8R1T1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp7Q8R1T1 Phf7-203ENSMUST00000226565 1971 ntBASIC21.8■■□□□ 1.08
Chmp7Q8R1T1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp7Q8R1T1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp7Q8R1T1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp7Q8R1T1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp7Q8R1T1 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp7Q8R1T1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp7Q8R1T1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp7Q8R1T1 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.79■■□□□ 1.08
Chmp7Q8R1T1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp7Q8R1T1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Chmp7Q8R1T1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp7Q8R1T1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp7Q8R1T1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp7Q8R1T1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp7Q8R1T1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp7Q8R1T1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp7Q8R1T1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp7Q8R1T1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.79■■□□□ 1.08
Chmp7Q8R1T1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp7Q8R1T1 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Chmp7Q8R1T1 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC21.79■■□□□ 1.08
Chmp7Q8R1T1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC21.79■■□□□ 1.08
Chmp7Q8R1T1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
Chmp7Q8R1T1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp7Q8R1T1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.79■■□□□ 1.08
Chmp7Q8R1T1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp7Q8R1T1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC21.78■■□□□ 1.08
Chmp7Q8R1T1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp7Q8R1T1 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp7Q8R1T1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp7Q8R1T1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Chmp7Q8R1T1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Chmp7Q8R1T1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp7Q8R1T1 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC21.78■■□□□ 1.08
Chmp7Q8R1T1 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp7Q8R1T1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp7Q8R1T1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp7Q8R1T1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp7Q8R1T1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp7Q8R1T1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp7Q8R1T1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp7Q8R1T1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.77■■□□□ 1.08
Chmp7Q8R1T1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chmp7Q8R1T1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chmp7Q8R1T1 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chmp7Q8R1T1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
Chmp7Q8R1T1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Chmp7Q8R1T1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC21.77■■□□□ 1.08
Chmp7Q8R1T1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chmp7Q8R1T1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Chmp7Q8R1T1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.77■■□□□ 1.08
Chmp7Q8R1T1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chmp7Q8R1T1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chmp7Q8R1T1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chmp7Q8R1T1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chmp7Q8R1T1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
Chmp7Q8R1T1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Chmp7Q8R1T1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Chmp7Q8R1T1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chmp7Q8R1T1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Chmp7Q8R1T1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chmp7Q8R1T1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chmp7Q8R1T1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
Chmp7Q8R1T1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Chmp7Q8R1T1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC21.76■■□□□ 1.07
Chmp7Q8R1T1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.76■■□□□ 1.07
Chmp7Q8R1T1 Gm34391-201ENSMUST00000203706 907 ntBASIC21.76■■□□□ 1.07
Chmp7Q8R1T1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chmp7Q8R1T1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms