Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nudcd3Q8R1N4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Nudcd3Q8R1N4 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nudcd3Q8R1N4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Nudcd3Q8R1N4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
Nudcd3Q8R1N4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nudcd3Q8R1N4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nudcd3Q8R1N4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nudcd3Q8R1N4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nudcd3Q8R1N4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.08■□□□□ 0.32
Nudcd3Q8R1N4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nudcd3Q8R1N4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nudcd3Q8R1N4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.08■□□□□ 0.32
Nudcd3Q8R1N4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nudcd3Q8R1N4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.08■□□□□ 0.32
Nudcd3Q8R1N4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Nudcd3Q8R1N4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.08■□□□□ 0.32
Nudcd3Q8R1N4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
Nudcd3Q8R1N4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nudcd3Q8R1N4 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nudcd3Q8R1N4 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nudcd3Q8R1N4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.08■□□□□ 0.32
Nudcd3Q8R1N4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nudcd3Q8R1N4 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Gm6211-202ENSMUST00000167849 925 ntBASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nudcd3Q8R1N4 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Gm7290-201ENSMUST00000104990 617 ntBASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Gm12918-201ENSMUST00000120234 636 ntBASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Gm15710-201ENSMUST00000121821 636 ntBASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Gm5075-201ENSMUST00000196916 622 ntBASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nudcd3Q8R1N4 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nudcd3Q8R1N4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nudcd3Q8R1N4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nudcd3Q8R1N4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nudcd3Q8R1N4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.05■□□□□ 0.32
Nudcd3Q8R1N4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nudcd3Q8R1N4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nudcd3Q8R1N4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nudcd3Q8R1N4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Nudcd3Q8R1N4 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.05■□□□□ 0.32
Nudcd3Q8R1N4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.05■□□□□ 0.32
Nudcd3Q8R1N4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Nudcd3Q8R1N4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.05■□□□□ 0.32
Nudcd3Q8R1N4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nudcd3Q8R1N4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nudcd3Q8R1N4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nudcd3Q8R1N4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Nudcd3Q8R1N4 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nudcd3Q8R1N4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.04■□□□□ 0.32
Nudcd3Q8R1N4 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nudcd3Q8R1N4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nudcd3Q8R1N4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms