Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.03■□□□□ 0.16
Tm6sf2Q8R1J1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tm6sf2Q8R1J1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Tm6sf2Q8R1J1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tm6sf2Q8R1J1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tm6sf2Q8R1J1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tm6sf2Q8R1J1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tm6sf2Q8R1J1 Gm13474-201ENSMUST00000122466 815 ntBASIC16.03■□□□□ 0.16
Tm6sf2Q8R1J1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.03■□□□□ 0.16
Tm6sf2Q8R1J1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.03■□□□□ 0.16
Tm6sf2Q8R1J1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tm6sf2Q8R1J1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tm6sf2Q8R1J1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tm6sf2Q8R1J1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tm6sf2Q8R1J1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Tm6sf2Q8R1J1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tm6sf2Q8R1J1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Tm6sf2Q8R1J1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.02■□□□□ 0.16
Tm6sf2Q8R1J1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tm6sf2Q8R1J1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Tm6sf2Q8R1J1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tm6sf2Q8R1J1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tm6sf2Q8R1J1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Tm6sf2Q8R1J1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
Tm6sf2Q8R1J1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Tm6sf2Q8R1J1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.02■□□□□ 0.16
Tm6sf2Q8R1J1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tm6sf2Q8R1J1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.02■□□□□ 0.16
Tm6sf2Q8R1J1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Tm6sf2Q8R1J1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tm6sf2Q8R1J1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Tm6sf2Q8R1J1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tm6sf2Q8R1J1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Tm6sf2Q8R1J1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tm6sf2Q8R1J1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tm6sf2Q8R1J1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Tm6sf2Q8R1J1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Tm6sf2Q8R1J1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tm6sf2Q8R1J1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tm6sf2Q8R1J1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tm6sf2Q8R1J1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tm6sf2Q8R1J1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Tm6sf2Q8R1J1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Tm6sf2Q8R1J1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Tm6sf2Q8R1J1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tm6sf2Q8R1J1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tm6sf2Q8R1J1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Tm6sf2Q8R1J1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tm6sf2Q8R1J1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.01■□□□□ 0.15
Tm6sf2Q8R1J1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tm6sf2Q8R1J1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tm6sf2Q8R1J1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tm6sf2Q8R1J1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tm6sf2Q8R1J1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tm6sf2Q8R1J1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tm6sf2Q8R1J1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Tm6sf2Q8R1J1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tm6sf2Q8R1J1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Tm6sf2Q8R1J1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tm6sf2Q8R1J1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16■□□□□ 0.15
Tm6sf2Q8R1J1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tm6sf2Q8R1J1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tm6sf2Q8R1J1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tm6sf2Q8R1J1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tm6sf2Q8R1J1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tm6sf2Q8R1J1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Tm6sf2Q8R1J1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16■□□□□ 0.15
Tm6sf2Q8R1J1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tm6sf2Q8R1J1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tm6sf2Q8R1J1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Tm6sf2Q8R1J1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tm6sf2Q8R1J1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Tm6sf2Q8R1J1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Tm6sf2Q8R1J1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tm6sf2Q8R1J1 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.99■□□□□ 0.15
Tm6sf2Q8R1J1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tm6sf2Q8R1J1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tm6sf2Q8R1J1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.99■□□□□ 0.15
Tm6sf2Q8R1J1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.99■□□□□ 0.15
Tm6sf2Q8R1J1 Gm7977-201ENSMUST00000193787 748 ntBASIC15.99■□□□□ 0.15
Tm6sf2Q8R1J1 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.99■□□□□ 0.15
Tm6sf2Q8R1J1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tm6sf2Q8R1J1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tm6sf2Q8R1J1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tm6sf2Q8R1J1 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tm6sf2Q8R1J1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tm6sf2Q8R1J1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Tm6sf2Q8R1J1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Tm6sf2Q8R1J1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tm6sf2Q8R1J1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Tm6sf2Q8R1J1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Tm6sf2Q8R1J1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tm6sf2Q8R1J1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Tm6sf2Q8R1J1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Tm6sf2Q8R1J1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Tm6sf2Q8R1J1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tm6sf2Q8R1J1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tm6sf2Q8R1J1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tm6sf2Q8R1J1 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tm6sf2Q8R1J1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms