Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Atf7Q8R0S1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Atf7Q8R0S1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.14■□□□□ 0.81
Atf7Q8R0S1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Atf7Q8R0S1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atf7Q8R0S1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atf7Q8R0S1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Atf7Q8R0S1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Atf7Q8R0S1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atf7Q8R0S1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atf7Q8R0S1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atf7Q8R0S1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atf7Q8R0S1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atf7Q8R0S1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atf7Q8R0S1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atf7Q8R0S1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Atf7Q8R0S1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atf7Q8R0S1 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.12■□□□□ 0.81
Atf7Q8R0S1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Atf7Q8R0S1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atf7Q8R0S1 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atf7Q8R0S1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atf7Q8R0S1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atf7Q8R0S1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.12■□□□□ 0.81
Atf7Q8R0S1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Atf7Q8R0S1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atf7Q8R0S1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Atf7Q8R0S1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.12■□□□□ 0.81
Atf7Q8R0S1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Atf7Q8R0S1 Gm7791-201ENSMUST00000219066 539 ntBASIC20.12■□□□□ 0.81
Atf7Q8R0S1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atf7Q8R0S1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atf7Q8R0S1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atf7Q8R0S1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Atf7Q8R0S1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Atf7Q8R0S1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atf7Q8R0S1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.11■□□□□ 0.81
Atf7Q8R0S1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Atf7Q8R0S1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atf7Q8R0S1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atf7Q8R0S1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20.11■□□□□ 0.81
Atf7Q8R0S1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Atf7Q8R0S1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.11■□□□□ 0.81
Atf7Q8R0S1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.11■□□□□ 0.81
Atf7Q8R0S1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atf7Q8R0S1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atf7Q8R0S1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Atf7Q8R0S1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atf7Q8R0S1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atf7Q8R0S1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atf7Q8R0S1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atf7Q8R0S1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atf7Q8R0S1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atf7Q8R0S1 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atf7Q8R0S1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Atf7Q8R0S1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Atf7Q8R0S1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Atf7Q8R0S1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Atf7Q8R0S1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Atf7Q8R0S1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.1■□□□□ 0.81
Atf7Q8R0S1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.1■□□□□ 0.81
Atf7Q8R0S1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Atf7Q8R0S1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Atf7Q8R0S1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Atf7Q8R0S1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Atf7Q8R0S1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Atf7Q8R0S1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Atf7Q8R0S1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Atf7Q8R0S1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Atf7Q8R0S1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Atf7Q8R0S1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Atf7Q8R0S1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Atf7Q8R0S1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Atf7Q8R0S1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Atf7Q8R0S1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.09■□□□□ 0.81
Atf7Q8R0S1 Gm27000-201ENSMUST00000182943 842 ntBASIC20.09■□□□□ 0.81
Atf7Q8R0S1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Atf7Q8R0S1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Atf7Q8R0S1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Atf7Q8R0S1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.09■□□□□ 0.81
Atf7Q8R0S1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Atf7Q8R0S1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Atf7Q8R0S1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Atf7Q8R0S1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Atf7Q8R0S1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Atf7Q8R0S1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Atf7Q8R0S1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Atf7Q8R0S1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Atf7Q8R0S1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Atf7Q8R0S1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Atf7Q8R0S1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Atf7Q8R0S1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Atf7Q8R0S1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Atf7Q8R0S1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
Atf7Q8R0S1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Atf7Q8R0S1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Atf7Q8R0S1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Atf7Q8R0S1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Atf7Q8R0S1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
Atf7Q8R0S1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms