Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm15590-201ENSMUST00000078419 552 ntBASIC22.33■■□□□ 1.17
Ddx54Q8K4L0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ddx54Q8K4L0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Ddx54Q8K4L0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ddx54Q8K4L0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ddx54Q8K4L0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ddx54Q8K4L0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ddx54Q8K4L0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx54Q8K4L0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx54Q8K4L0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx54Q8K4L0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC22.32■■□□□ 1.16
Ddx54Q8K4L0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC22.32■■□□□ 1.16
Ddx54Q8K4L0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Ddx54Q8K4L0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC22.32■■□□□ 1.16
Ddx54Q8K4L0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC22.32■■□□□ 1.16
Ddx54Q8K4L0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx54Q8K4L0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx54Q8K4L0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC22.32■■□□□ 1.16
Ddx54Q8K4L0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx54Q8K4L0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Ddx54Q8K4L0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx54Q8K4L0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx54Q8K4L0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx54Q8K4L0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx54Q8K4L0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx54Q8K4L0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC22.31■■□□□ 1.16
Ddx54Q8K4L0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx54Q8K4L0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx54Q8K4L0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC22.31■■□□□ 1.16
Ddx54Q8K4L0 AC154222.1-201ENSMUST00000223882 475 ntBASIC22.31■■□□□ 1.16
Ddx54Q8K4L0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx54Q8K4L0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx54Q8K4L0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Ddx54Q8K4L0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx54Q8K4L0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC22.31■■□□□ 1.16
Ddx54Q8K4L0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx54Q8K4L0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC22.3■■□□□ 1.16
Ddx54Q8K4L0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Ddx54Q8K4L0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Ddx54Q8K4L0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx54Q8K4L0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx54Q8K4L0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx54Q8K4L0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx54Q8K4L0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx54Q8K4L0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx54Q8K4L0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx54Q8K4L0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx54Q8K4L0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx54Q8K4L0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx54Q8K4L0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx54Q8K4L0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx54Q8K4L0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx54Q8K4L0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx54Q8K4L0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx54Q8K4L0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC22.29■■□□□ 1.16
Ddx54Q8K4L0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx54Q8K4L0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC22.29■■□□□ 1.16
Ddx54Q8K4L0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx54Q8K4L0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx54Q8K4L0 Fst-202ENSMUST00000223640 2612 ntBASIC22.29■■□□□ 1.16
Ddx54Q8K4L0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx54Q8K4L0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
Ddx54Q8K4L0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx54Q8K4L0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Ddx54Q8K4L0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx54Q8K4L0 Idnk-204ENSMUST00000226010 1898 ntBASIC22.28■■□□□ 1.16
Ddx54Q8K4L0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx54Q8K4L0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx54Q8K4L0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx54Q8K4L0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
Ddx54Q8K4L0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Ddx54Q8K4L0 Gm15173-201ENSMUST00000122049 433 ntBASIC22.28■■□□□ 1.16
Ddx54Q8K4L0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx54Q8K4L0 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC22.28■■□□□ 1.16
Ddx54Q8K4L0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC22.28■■□□□ 1.16
Ddx54Q8K4L0 CT009713.7-201ENSMUST00000224689 571 ntBASIC22.28■■□□□ 1.16
Ddx54Q8K4L0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx54Q8K4L0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx54Q8K4L0 Gm43272-201ENSMUST00000200599 1584 ntBASIC22.28■■□□□ 1.16
Ddx54Q8K4L0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx54Q8K4L0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx54Q8K4L0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC22.27■■□□□ 1.16
Ddx54Q8K4L0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx54Q8K4L0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx54Q8K4L0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx54Q8K4L0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx54Q8K4L0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx54Q8K4L0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx54Q8K4L0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx54Q8K4L0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx54Q8K4L0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx54Q8K4L0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx54Q8K4L0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx54Q8K4L0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx54Q8K4L0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.15
Ddx54Q8K4L0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.15
Ddx54Q8K4L0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx54Q8K4L0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx54Q8K4L0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx54Q8K4L0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 151.2 ms