Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.65■□□□□ 0.26
Alms1Q8K4E0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Alms1Q8K4E0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Alms1Q8K4E0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.64■□□□□ 0.25
Alms1Q8K4E0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Alms1Q8K4E0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.64■□□□□ 0.25
Alms1Q8K4E0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Alms1Q8K4E0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.64■□□□□ 0.25
Alms1Q8K4E0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Alms1Q8K4E0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.64■□□□□ 0.25
Alms1Q8K4E0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.64■□□□□ 0.25
Alms1Q8K4E0 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Alms1Q8K4E0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Alms1Q8K4E0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Alms1Q8K4E0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.64■□□□□ 0.25
Alms1Q8K4E0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Alms1Q8K4E0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Alms1Q8K4E0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Alms1Q8K4E0 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.64■□□□□ 0.25
Alms1Q8K4E0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Alms1Q8K4E0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Alms1Q8K4E0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Alms1Q8K4E0 Gm13884-201ENSMUST00000118103 829 ntBASIC16.64■□□□□ 0.25
Alms1Q8K4E0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.63■□□□□ 0.25
Alms1Q8K4E0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.63■□□□□ 0.25
Alms1Q8K4E0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Alms1Q8K4E0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.63■□□□□ 0.25
Alms1Q8K4E0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.63■□□□□ 0.25
Alms1Q8K4E0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Alms1Q8K4E0 Gm2651-201ENSMUST00000203560 838 ntBASIC16.63■□□□□ 0.25
Alms1Q8K4E0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Alms1Q8K4E0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Alms1Q8K4E0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Alms1Q8K4E0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.63■□□□□ 0.25
Alms1Q8K4E0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Alms1Q8K4E0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Alms1Q8K4E0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.63■□□□□ 0.25
Alms1Q8K4E0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Alms1Q8K4E0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Alms1Q8K4E0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Alms1Q8K4E0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Alms1Q8K4E0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.63■□□□□ 0.25
Alms1Q8K4E0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Alms1Q8K4E0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Alms1Q8K4E0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Alms1Q8K4E0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Alms1Q8K4E0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Alms1Q8K4E0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.62■□□□□ 0.25
Alms1Q8K4E0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Alms1Q8K4E0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Alms1Q8K4E0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Alms1Q8K4E0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Alms1Q8K4E0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Alms1Q8K4E0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Alms1Q8K4E0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Alms1Q8K4E0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Alms1Q8K4E0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Alms1Q8K4E0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
Alms1Q8K4E0 Gm18206-201ENSMUST00000207027 926 ntBASIC16.62■□□□□ 0.25
Alms1Q8K4E0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.62■□□□□ 0.25
Alms1Q8K4E0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Alms1Q8K4E0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Alms1Q8K4E0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Alms1Q8K4E0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.62■□□□□ 0.25
Alms1Q8K4E0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.62■□□□□ 0.25
Alms1Q8K4E0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Alms1Q8K4E0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.62■□□□□ 0.25
Alms1Q8K4E0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Alms1Q8K4E0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.62■□□□□ 0.25
Alms1Q8K4E0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Alms1Q8K4E0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Alms1Q8K4E0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Alms1Q8K4E0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Alms1Q8K4E0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.61■□□□□ 0.25
Alms1Q8K4E0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Alms1Q8K4E0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Alms1Q8K4E0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Alms1Q8K4E0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Alms1Q8K4E0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Alms1Q8K4E0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Alms1Q8K4E0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC16.61■□□□□ 0.25
Alms1Q8K4E0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.61■□□□□ 0.25
Alms1Q8K4E0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Alms1Q8K4E0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.61■□□□□ 0.25
Alms1Q8K4E0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.61■□□□□ 0.25
Alms1Q8K4E0 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.61■□□□□ 0.25
Alms1Q8K4E0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Alms1Q8K4E0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Alms1Q8K4E0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Alms1Q8K4E0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Alms1Q8K4E0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.6■□□□□ 0.25
Alms1Q8K4E0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Alms1Q8K4E0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alms1Q8K4E0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alms1Q8K4E0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Alms1Q8K4E0 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.6■□□□□ 0.25
Alms1Q8K4E0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Alms1Q8K4E0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alms1Q8K4E0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Alms1Q8K4E0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms