Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Mir5133-201ENSMUST00000174955 77 ntBASIC10.73□□□□□ -0.69
Cystm1Q8K353 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Gm42555-201ENSMUST00000199304 1039 ntBASIC10.73□□□□□ -0.69
Cystm1Q8K353 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cystm1Q8K353 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Gm11841-201ENSMUST00000117060 1963 ntBASIC10.73□□□□□ -0.69
Cystm1Q8K353 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cystm1Q8K353 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cystm1Q8K353 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Gm16499-203ENSMUST00000204633 2177 ntBASIC10.73□□□□□ -0.69
Cystm1Q8K353 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cystm1Q8K353 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC10.72□□□□□ -0.69
Cystm1Q8K353 Gm13534-201ENSMUST00000121169 513 ntBASIC10.72□□□□□ -0.69
Cystm1Q8K353 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC10.72□□□□□ -0.69
Cystm1Q8K353 CT010467.1-202ENSMUST00000205406 714 ntBASIC10.72□□□□□ -0.69
Cystm1Q8K353 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cystm1Q8K353 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cystm1Q8K353 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC10.71□□□□□ -0.69
Cystm1Q8K353 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cystm1Q8K353 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cystm1Q8K353 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cystm1Q8K353 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cystm1Q8K353 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cystm1Q8K353 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC10.71□□□□□ -0.69
Cystm1Q8K353 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC10.71□□□□□ -0.69
Cystm1Q8K353 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cystm1Q8K353 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cystm1Q8K353 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC10.71□□□□□ -0.69
Cystm1Q8K353 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cystm1Q8K353 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cystm1Q8K353 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC10.71□□□□□ -0.69
Cystm1Q8K353 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC10.71□□□□□ -0.69
Cystm1Q8K353 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC10.71□□□□□ -0.69
Cystm1Q8K353 CT025689.6-201ENSMUST00000224991 1104 ntBASIC10.71□□□□□ -0.69
Cystm1Q8K353 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cystm1Q8K353 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cystm1Q8K353 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cystm1Q8K353 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cystm1Q8K353 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Cystm1Q8K353 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cystm1Q8K353 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cystm1Q8K353 Gm10655-201ENSMUST00000098658 1397 ntBASIC10.71□□□□□ -0.69
Cystm1Q8K353 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cystm1Q8K353 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Cystm1Q8K353 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cystm1Q8K353 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.7
Cystm1Q8K353 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC10.71□□□□□ -0.7
Cystm1Q8K353 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cystm1Q8K353 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cystm1Q8K353 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cystm1Q8K353 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cystm1Q8K353 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cystm1Q8K353 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cystm1Q8K353 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cystm1Q8K353 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cystm1Q8K353 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cystm1Q8K353 Prob1-201ENSMUST00000097619 3021 ntBASIC10.7□□□□□ -0.7
Cystm1Q8K353 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cystm1Q8K353 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cystm1Q8K353 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms