Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Haglr-201ENSMUST00000100000 2085 ntBASIC20.17■□□□□ 0.82
Cchcr1Q8K2I2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cchcr1Q8K2I2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cchcr1Q8K2I2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cchcr1Q8K2I2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cchcr1Q8K2I2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cchcr1Q8K2I2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Cchcr1Q8K2I2 Gm13216-201ENSMUST00000117145 591 ntBASIC20.16■□□□□ 0.82
Cchcr1Q8K2I2 Gm17661-201ENSMUST00000170317 270 ntBASIC20.16■□□□□ 0.82
Cchcr1Q8K2I2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cchcr1Q8K2I2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cchcr1Q8K2I2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cchcr1Q8K2I2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cchcr1Q8K2I2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Cchcr1Q8K2I2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Cchcr1Q8K2I2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cchcr1Q8K2I2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.16■□□□□ 0.82
Cchcr1Q8K2I2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
Cchcr1Q8K2I2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20.15■□□□□ 0.82
Cchcr1Q8K2I2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cchcr1Q8K2I2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cchcr1Q8K2I2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cchcr1Q8K2I2 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.15■□□□□ 0.82
Cchcr1Q8K2I2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cchcr1Q8K2I2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cchcr1Q8K2I2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cchcr1Q8K2I2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cchcr1Q8K2I2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cchcr1Q8K2I2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cchcr1Q8K2I2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Cchcr1Q8K2I2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cchcr1Q8K2I2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Cchcr1Q8K2I2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cchcr1Q8K2I2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Cchcr1Q8K2I2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Cchcr1Q8K2I2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cchcr1Q8K2I2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cchcr1Q8K2I2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cchcr1Q8K2I2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cchcr1Q8K2I2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cchcr1Q8K2I2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Cchcr1Q8K2I2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.14■□□□□ 0.81
Cchcr1Q8K2I2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.14■□□□□ 0.81
Cchcr1Q8K2I2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.14■□□□□ 0.81
Cchcr1Q8K2I2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cchcr1Q8K2I2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cchcr1Q8K2I2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cchcr1Q8K2I2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cchcr1Q8K2I2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Cchcr1Q8K2I2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cchcr1Q8K2I2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Cchcr1Q8K2I2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Cchcr1Q8K2I2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Cchcr1Q8K2I2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cchcr1Q8K2I2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Cchcr1Q8K2I2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cchcr1Q8K2I2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Cchcr1Q8K2I2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Cchcr1Q8K2I2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cchcr1Q8K2I2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cchcr1Q8K2I2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cchcr1Q8K2I2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cchcr1Q8K2I2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cchcr1Q8K2I2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cchcr1Q8K2I2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cchcr1Q8K2I2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cchcr1Q8K2I2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Cchcr1Q8K2I2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cchcr1Q8K2I2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cchcr1Q8K2I2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cchcr1Q8K2I2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cchcr1Q8K2I2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Cchcr1Q8K2I2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Cchcr1Q8K2I2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cchcr1Q8K2I2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cchcr1Q8K2I2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC20.12■□□□□ 0.81
Cchcr1Q8K2I2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cchcr1Q8K2I2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cchcr1Q8K2I2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cchcr1Q8K2I2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cchcr1Q8K2I2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.12■□□□□ 0.81
Cchcr1Q8K2I2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cchcr1Q8K2I2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cchcr1Q8K2I2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cchcr1Q8K2I2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cchcr1Q8K2I2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cchcr1Q8K2I2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cchcr1Q8K2I2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cchcr1Q8K2I2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cchcr1Q8K2I2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cchcr1Q8K2I2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cchcr1Q8K2I2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Cchcr1Q8K2I2 Gm10698-201ENSMUST00000182663 604 ntBASIC20.11■□□□□ 0.81
Cchcr1Q8K2I2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.11■□□□□ 0.81
Cchcr1Q8K2I2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cchcr1Q8K2I2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cchcr1Q8K2I2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.11■□□□□ 0.81
Cchcr1Q8K2I2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cchcr1Q8K2I2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Cchcr1Q8K2I2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms