Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Depdc1aQ8CIG0 Mir770-201ENSMUST00000103252 94 ntBASIC19.23■□□□□ 0.67
Depdc1aQ8CIG0 Gm11950-201ENSMUST00000121615 838 ntBASIC19.23■□□□□ 0.67
Depdc1aQ8CIG0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Depdc1aQ8CIG0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Depdc1aQ8CIG0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Depdc1aQ8CIG0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Depdc1aQ8CIG0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Depdc1aQ8CIG0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.23■□□□□ 0.67
Depdc1aQ8CIG0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Depdc1aQ8CIG0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Depdc1aQ8CIG0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.22■□□□□ 0.67
Depdc1aQ8CIG0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Depdc1aQ8CIG0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Depdc1aQ8CIG0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Depdc1aQ8CIG0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Depdc1aQ8CIG0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Depdc1aQ8CIG0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Depdc1aQ8CIG0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Depdc1aQ8CIG0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Depdc1aQ8CIG0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Depdc1aQ8CIG0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Depdc1aQ8CIG0 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.22■□□□□ 0.67
Depdc1aQ8CIG0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.22■□□□□ 0.67
Depdc1aQ8CIG0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Depdc1aQ8CIG0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Depdc1aQ8CIG0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Depdc1aQ8CIG0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Depdc1aQ8CIG0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.22■□□□□ 0.67
Depdc1aQ8CIG0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Depdc1aQ8CIG0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Depdc1aQ8CIG0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Depdc1aQ8CIG0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Depdc1aQ8CIG0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Depdc1aQ8CIG0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Depdc1aQ8CIG0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Depdc1aQ8CIG0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Depdc1aQ8CIG0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Depdc1aQ8CIG0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Depdc1aQ8CIG0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Depdc1aQ8CIG0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Depdc1aQ8CIG0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Depdc1aQ8CIG0 Gm14859-201ENSMUST00000117752 357 ntBASIC19.21■□□□□ 0.67
Depdc1aQ8CIG0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.21■□□□□ 0.67
Depdc1aQ8CIG0 Gm27704-201ENSMUST00000185094 107 ntBASIC19.21■□□□□ 0.67
Depdc1aQ8CIG0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Depdc1aQ8CIG0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Depdc1aQ8CIG0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Depdc1aQ8CIG0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Depdc1aQ8CIG0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Depdc1aQ8CIG0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Depdc1aQ8CIG0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Depdc1aQ8CIG0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.21■□□□□ 0.67
Depdc1aQ8CIG0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Depdc1aQ8CIG0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Depdc1aQ8CIG0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Depdc1aQ8CIG0 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.2■□□□□ 0.66
Depdc1aQ8CIG0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Depdc1aQ8CIG0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Depdc1aQ8CIG0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Depdc1aQ8CIG0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Depdc1aQ8CIG0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Depdc1aQ8CIG0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Depdc1aQ8CIG0 Gm11336-201ENSMUST00000118168 334 ntBASIC19.2■□□□□ 0.66
Depdc1aQ8CIG0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Depdc1aQ8CIG0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Depdc1aQ8CIG0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Depdc1aQ8CIG0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Depdc1aQ8CIG0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Depdc1aQ8CIG0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Depdc1aQ8CIG0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Depdc1aQ8CIG0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Depdc1aQ8CIG0 Gm6623-201ENSMUST00000173570 544 ntBASIC19.19■□□□□ 0.66
Depdc1aQ8CIG0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Depdc1aQ8CIG0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.19■□□□□ 0.66
Depdc1aQ8CIG0 Ank2-226ENSMUST00000189368 339 ntBASIC19.19■□□□□ 0.66
Depdc1aQ8CIG0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.19■□□□□ 0.66
Depdc1aQ8CIG0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Depdc1aQ8CIG0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Depdc1aQ8CIG0 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.19■□□□□ 0.66
Depdc1aQ8CIG0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.19■□□□□ 0.66
Depdc1aQ8CIG0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Depdc1aQ8CIG0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Depdc1aQ8CIG0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Depdc1aQ8CIG0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Depdc1aQ8CIG0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Depdc1aQ8CIG0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
Depdc1aQ8CIG0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Depdc1aQ8CIG0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Depdc1aQ8CIG0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Depdc1aQ8CIG0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.18■□□□□ 0.66
Depdc1aQ8CIG0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Depdc1aQ8CIG0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Depdc1aQ8CIG0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.18■□□□□ 0.66
Depdc1aQ8CIG0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.18■□□□□ 0.66
Depdc1aQ8CIG0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Depdc1aQ8CIG0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Depdc1aQ8CIG0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Depdc1aQ8CIG0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Depdc1aQ8CIG0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms