Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.18■□□□□ 0.34
Clip4Q8CI96 Gm12382-201ENSMUST00000122005 922 ntBASIC17.18■□□□□ 0.34
Clip4Q8CI96 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.18■□□□□ 0.34
Clip4Q8CI96 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Clip4Q8CI96 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clip4Q8CI96 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clip4Q8CI96 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clip4Q8CI96 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clip4Q8CI96 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clip4Q8CI96 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clip4Q8CI96 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clip4Q8CI96 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clip4Q8CI96 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Clip4Q8CI96 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Clip4Q8CI96 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clip4Q8CI96 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.17■□□□□ 0.34
Clip4Q8CI96 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Clip4Q8CI96 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Clip4Q8CI96 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Clip4Q8CI96 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clip4Q8CI96 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clip4Q8CI96 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.17■□□□□ 0.34
Clip4Q8CI96 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Clip4Q8CI96 Mir6982-201ENSMUST00000184354 68 ntBASIC17.17■□□□□ 0.34
Clip4Q8CI96 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.17■□□□□ 0.34
Clip4Q8CI96 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Clip4Q8CI96 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clip4Q8CI96 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.17■□□□□ 0.34
Clip4Q8CI96 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.17■□□□□ 0.34
Clip4Q8CI96 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clip4Q8CI96 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clip4Q8CI96 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clip4Q8CI96 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clip4Q8CI96 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clip4Q8CI96 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clip4Q8CI96 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.17■□□□□ 0.34
Clip4Q8CI96 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clip4Q8CI96 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clip4Q8CI96 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Clip4Q8CI96 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clip4Q8CI96 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Clip4Q8CI96 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clip4Q8CI96 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Clip4Q8CI96 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clip4Q8CI96 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.16■□□□□ 0.34
Clip4Q8CI96 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Clip4Q8CI96 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clip4Q8CI96 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.16■□□□□ 0.34
Clip4Q8CI96 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clip4Q8CI96 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clip4Q8CI96 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
Clip4Q8CI96 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clip4Q8CI96 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clip4Q8CI96 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Clip4Q8CI96 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clip4Q8CI96 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clip4Q8CI96 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clip4Q8CI96 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clip4Q8CI96 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Clip4Q8CI96 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clip4Q8CI96 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clip4Q8CI96 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clip4Q8CI96 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clip4Q8CI96 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clip4Q8CI96 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clip4Q8CI96 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clip4Q8CI96 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clip4Q8CI96 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clip4Q8CI96 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.15■□□□□ 0.34
Clip4Q8CI96 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clip4Q8CI96 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clip4Q8CI96 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clip4Q8CI96 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clip4Q8CI96 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.15■□□□□ 0.34
Clip4Q8CI96 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clip4Q8CI96 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Clip4Q8CI96 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clip4Q8CI96 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clip4Q8CI96 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Clip4Q8CI96 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Clip4Q8CI96 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clip4Q8CI96 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clip4Q8CI96 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clip4Q8CI96 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clip4Q8CI96 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.14■□□□□ 0.33
Clip4Q8CI96 Gm11643-201ENSMUST00000119578 864 ntBASIC17.14■□□□□ 0.33
Clip4Q8CI96 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.14■□□□□ 0.33
Clip4Q8CI96 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clip4Q8CI96 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clip4Q8CI96 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.14■□□□□ 0.33
Clip4Q8CI96 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clip4Q8CI96 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Clip4Q8CI96 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clip4Q8CI96 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clip4Q8CI96 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clip4Q8CI96 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clip4Q8CI96 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clip4Q8CI96 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clip4Q8CI96 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Clip4Q8CI96 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms