Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Zc3h3Q8CHP0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Zc3h3Q8CHP0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.68■□□□□ 0.26
Zc3h3Q8CHP0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Zc3h3Q8CHP0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Zc3h3Q8CHP0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.68■□□□□ 0.26
Zc3h3Q8CHP0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Zc3h3Q8CHP0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Zc3h3Q8CHP0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.68■□□□□ 0.26
Zc3h3Q8CHP0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.68■□□□□ 0.26
Zc3h3Q8CHP0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Zc3h3Q8CHP0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Zc3h3Q8CHP0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Zc3h3Q8CHP0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Zc3h3Q8CHP0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Zc3h3Q8CHP0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Zc3h3Q8CHP0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Zc3h3Q8CHP0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
Zc3h3Q8CHP0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Zc3h3Q8CHP0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Zc3h3Q8CHP0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Zc3h3Q8CHP0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Zc3h3Q8CHP0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Zc3h3Q8CHP0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Zc3h3Q8CHP0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Zc3h3Q8CHP0 Gm6089-201ENSMUST00000197666 938 ntBASIC16.67■□□□□ 0.26
Zc3h3Q8CHP0 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.67■□□□□ 0.26
Zc3h3Q8CHP0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Zc3h3Q8CHP0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Zc3h3Q8CHP0 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.67■□□□□ 0.26
Zc3h3Q8CHP0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.67■□□□□ 0.26
Zc3h3Q8CHP0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Zc3h3Q8CHP0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Zc3h3Q8CHP0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Zc3h3Q8CHP0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Zc3h3Q8CHP0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Zc3h3Q8CHP0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Zc3h3Q8CHP0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Zc3h3Q8CHP0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Zc3h3Q8CHP0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.67■□□□□ 0.26
Zc3h3Q8CHP0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Zc3h3Q8CHP0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Zc3h3Q8CHP0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Zc3h3Q8CHP0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Zc3h3Q8CHP0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Zc3h3Q8CHP0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Zc3h3Q8CHP0 Gm15173-201ENSMUST00000122049 433 ntBASIC16.66■□□□□ 0.26
Zc3h3Q8CHP0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Zc3h3Q8CHP0 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.66■□□□□ 0.26
Zc3h3Q8CHP0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.66■□□□□ 0.26
Zc3h3Q8CHP0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Zc3h3Q8CHP0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Zc3h3Q8CHP0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Zc3h3Q8CHP0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Zc3h3Q8CHP0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Zc3h3Q8CHP0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Zc3h3Q8CHP0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Zc3h3Q8CHP0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Zc3h3Q8CHP0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Zc3h3Q8CHP0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Zc3h3Q8CHP0 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.65■□□□□ 0.26
Zc3h3Q8CHP0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Zc3h3Q8CHP0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Zc3h3Q8CHP0 Gm8097-201ENSMUST00000117903 829 ntBASIC16.65■□□□□ 0.26
Zc3h3Q8CHP0 Gm15920-201ENSMUST00000118998 402 ntBASIC16.65■□□□□ 0.26
Zc3h3Q8CHP0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.65■□□□□ 0.26
Zc3h3Q8CHP0 Gm9727-201ENSMUST00000161387 555 ntBASIC16.65■□□□□ 0.26
Zc3h3Q8CHP0 Gm7230-201ENSMUST00000173026 815 ntBASIC16.65■□□□□ 0.26
Zc3h3Q8CHP0 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.65■□□□□ 0.26
Zc3h3Q8CHP0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Zc3h3Q8CHP0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Zc3h3Q8CHP0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Zc3h3Q8CHP0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Zc3h3Q8CHP0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Zc3h3Q8CHP0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Zc3h3Q8CHP0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Zc3h3Q8CHP0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Zc3h3Q8CHP0 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.64■□□□□ 0.25
Zc3h3Q8CHP0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Zc3h3Q8CHP0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Zc3h3Q8CHP0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Zc3h3Q8CHP0 Gm14140-201ENSMUST00000119999 995 ntBASIC16.64■□□□□ 0.25
Zc3h3Q8CHP0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.64■□□□□ 0.25
Zc3h3Q8CHP0 Gm27000-201ENSMUST00000182943 842 ntBASIC16.64■□□□□ 0.25
Zc3h3Q8CHP0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.64■□□□□ 0.25
Zc3h3Q8CHP0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Zc3h3Q8CHP0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Zc3h3Q8CHP0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Zc3h3Q8CHP0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Zc3h3Q8CHP0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Zc3h3Q8CHP0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Zc3h3Q8CHP0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Zc3h3Q8CHP0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Zc3h3Q8CHP0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Zc3h3Q8CHP0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Zc3h3Q8CHP0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Zc3h3Q8CHP0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Zc3h3Q8CHP0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Zc3h3Q8CHP0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Zc3h3Q8CHP0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms