Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox30Q8CGW4 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox30Q8CGW4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox30Q8CGW4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox30Q8CGW4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Sox30Q8CGW4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.67■□□□□ 0.58
Sox30Q8CGW4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox30Q8CGW4 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.67■□□□□ 0.58
Sox30Q8CGW4 Gm37025-201ENSMUST00000195159 829 ntBASIC18.67■□□□□ 0.58
Sox30Q8CGW4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.67■□□□□ 0.58
Sox30Q8CGW4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.67■□□□□ 0.58
Sox30Q8CGW4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox30Q8CGW4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox30Q8CGW4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox30Q8CGW4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sox30Q8CGW4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox30Q8CGW4 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox30Q8CGW4 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox30Q8CGW4 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.66■□□□□ 0.58
Sox30Q8CGW4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Sox30Q8CGW4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox30Q8CGW4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox30Q8CGW4 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox30Q8CGW4 Gm12382-201ENSMUST00000122005 922 ntBASIC18.66■□□□□ 0.58
Sox30Q8CGW4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sox30Q8CGW4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Sox30Q8CGW4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.66■□□□□ 0.58
Sox30Q8CGW4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.66■□□□□ 0.58
Sox30Q8CGW4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox30Q8CGW4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox30Q8CGW4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Sox30Q8CGW4 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox30Q8CGW4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.66■□□□□ 0.58
Sox30Q8CGW4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox30Q8CGW4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.66■□□□□ 0.58
Sox30Q8CGW4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox30Q8CGW4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox30Q8CGW4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.65■□□□□ 0.58
Sox30Q8CGW4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox30Q8CGW4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox30Q8CGW4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Sox30Q8CGW4 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sox30Q8CGW4 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Sox30Q8CGW4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.65■□□□□ 0.58
Sox30Q8CGW4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.65■□□□□ 0.58
Sox30Q8CGW4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox30Q8CGW4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox30Q8CGW4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox30Q8CGW4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox30Q8CGW4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox30Q8CGW4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox30Q8CGW4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox30Q8CGW4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox30Q8CGW4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox30Q8CGW4 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.65■□□□□ 0.58
Sox30Q8CGW4 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sox30Q8CGW4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox30Q8CGW4 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sox30Q8CGW4 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sox30Q8CGW4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox30Q8CGW4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Sox30Q8CGW4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.64■□□□□ 0.57
Sox30Q8CGW4 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox30Q8CGW4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.64■□□□□ 0.57
Sox30Q8CGW4 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox30Q8CGW4 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox30Q8CGW4 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox30Q8CGW4 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.64■□□□□ 0.57
Sox30Q8CGW4 Gm27000-201ENSMUST00000182943 842 ntBASIC18.64■□□□□ 0.57
Sox30Q8CGW4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.64■□□□□ 0.57
Sox30Q8CGW4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox30Q8CGW4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sox30Q8CGW4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.64■□□□□ 0.57
Sox30Q8CGW4 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox30Q8CGW4 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sox30Q8CGW4 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox30Q8CGW4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox30Q8CGW4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox30Q8CGW4 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox30Q8CGW4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Sox30Q8CGW4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sox30Q8CGW4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.63■□□□□ 0.57
Sox30Q8CGW4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Sox30Q8CGW4 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Sox30Q8CGW4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sox30Q8CGW4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox30Q8CGW4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox30Q8CGW4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sox30Q8CGW4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox30Q8CGW4 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sox30Q8CGW4 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.63■□□□□ 0.57
Sox30Q8CGW4 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox30Q8CGW4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox30Q8CGW4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.62■□□□□ 0.57
Sox30Q8CGW4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox30Q8CGW4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.62■□□□□ 0.57
Sox30Q8CGW4 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox30Q8CGW4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox30Q8CGW4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox30Q8CGW4 Gm27275-201ENSMUST00000184318 272 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms