Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.58■□□□□ 0.25
Rdh1Q8CGV4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Rdh1Q8CGV4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rdh1Q8CGV4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Rdh1Q8CGV4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.58■□□□□ 0.24
Rdh1Q8CGV4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.58■□□□□ 0.24
Rdh1Q8CGV4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Rdh1Q8CGV4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rdh1Q8CGV4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rdh1Q8CGV4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Rdh1Q8CGV4 Gm10819-201ENSMUST00000099988 561 ntBASIC16.58■□□□□ 0.24
Rdh1Q8CGV4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rdh1Q8CGV4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rdh1Q8CGV4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rdh1Q8CGV4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rdh1Q8CGV4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rdh1Q8CGV4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rdh1Q8CGV4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.58■□□□□ 0.24
Rdh1Q8CGV4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.58■□□□□ 0.24
Rdh1Q8CGV4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rdh1Q8CGV4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.58■□□□□ 0.24
Rdh1Q8CGV4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rdh1Q8CGV4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Rdh1Q8CGV4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh1Q8CGV4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Rdh1Q8CGV4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Rdh1Q8CGV4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh1Q8CGV4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh1Q8CGV4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh1Q8CGV4 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh1Q8CGV4 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rdh1Q8CGV4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh1Q8CGV4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh1Q8CGV4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rdh1Q8CGV4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rdh1Q8CGV4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh1Q8CGV4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh1Q8CGV4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh1Q8CGV4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rdh1Q8CGV4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh1Q8CGV4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rdh1Q8CGV4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh1Q8CGV4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.57■□□□□ 0.24
Rdh1Q8CGV4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh1Q8CGV4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh1Q8CGV4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh1Q8CGV4 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.56■□□□□ 0.24
Rdh1Q8CGV4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.56■□□□□ 0.24
Rdh1Q8CGV4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh1Q8CGV4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Rdh1Q8CGV4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Rdh1Q8CGV4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Rdh1Q8CGV4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.56■□□□□ 0.24
Rdh1Q8CGV4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh1Q8CGV4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Rdh1Q8CGV4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh1Q8CGV4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh1Q8CGV4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Rdh1Q8CGV4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Rdh1Q8CGV4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh1Q8CGV4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh1Q8CGV4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.55■□□□□ 0.24
Rdh1Q8CGV4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh1Q8CGV4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh1Q8CGV4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh1Q8CGV4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh1Q8CGV4 Gm14859-201ENSMUST00000117752 357 ntBASIC16.55■□□□□ 0.24
Rdh1Q8CGV4 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.55■□□□□ 0.24
Rdh1Q8CGV4 Gm37722-201ENSMUST00000193757 208 ntBASIC16.55■□□□□ 0.24
Rdh1Q8CGV4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh1Q8CGV4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Rdh1Q8CGV4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh1Q8CGV4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Rdh1Q8CGV4 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh1Q8CGV4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh1Q8CGV4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh1Q8CGV4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.54■□□□□ 0.24
Rdh1Q8CGV4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh1Q8CGV4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.54■□□□□ 0.24
Rdh1Q8CGV4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh1Q8CGV4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh1Q8CGV4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh1Q8CGV4 Gm7284-201ENSMUST00000131667 944 ntBASIC16.54■□□□□ 0.24
Rdh1Q8CGV4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh1Q8CGV4 Gm29518-201ENSMUST00000190858 372 ntBASIC16.54■□□□□ 0.24
Rdh1Q8CGV4 Gm17808-201ENSMUST00000200859 894 ntBASIC16.54■□□□□ 0.24
Rdh1Q8CGV4 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.54■□□□□ 0.24
Rdh1Q8CGV4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh1Q8CGV4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh1Q8CGV4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh1Q8CGV4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh1Q8CGV4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh1Q8CGV4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh1Q8CGV4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh1Q8CGV4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rdh1Q8CGV4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh1Q8CGV4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh1Q8CGV4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh1Q8CGV4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh1Q8CGV4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms