Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rp1l1Q8CGM2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rp1l1Q8CGM2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rp1l1Q8CGM2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rp1l1Q8CGM2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rp1l1Q8CGM2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rp1l1Q8CGM2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rp1l1Q8CGM2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rp1l1Q8CGM2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Rp1l1Q8CGM2 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rp1l1Q8CGM2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rp1l1Q8CGM2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rp1l1Q8CGM2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rp1l1Q8CGM2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Rp1l1Q8CGM2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rp1l1Q8CGM2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rp1l1Q8CGM2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.73■□□□□ 0.43
Rp1l1Q8CGM2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.73■□□□□ 0.43
Rp1l1Q8CGM2 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.73■□□□□ 0.43
Rp1l1Q8CGM2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rp1l1Q8CGM2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.72■□□□□ 0.43
Rp1l1Q8CGM2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rp1l1Q8CGM2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rp1l1Q8CGM2 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rp1l1Q8CGM2 Gm44430-201ENSMUST00000203376 995 ntBASIC17.72■□□□□ 0.43
Rp1l1Q8CGM2 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.72■□□□□ 0.43
Rp1l1Q8CGM2 Gm10175-201ENSMUST00000086013 645 ntBASIC17.72■□□□□ 0.43
Rp1l1Q8CGM2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rp1l1Q8CGM2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rp1l1Q8CGM2 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rp1l1Q8CGM2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rp1l1Q8CGM2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rp1l1Q8CGM2 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rp1l1Q8CGM2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rp1l1Q8CGM2 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rp1l1Q8CGM2 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rp1l1Q8CGM2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.71■□□□□ 0.43
Rp1l1Q8CGM2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.71■□□□□ 0.43
Rp1l1Q8CGM2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rp1l1Q8CGM2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rp1l1Q8CGM2 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.71■□□□□ 0.43
Rp1l1Q8CGM2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rp1l1Q8CGM2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rp1l1Q8CGM2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rp1l1Q8CGM2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rp1l1Q8CGM2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rp1l1Q8CGM2 Gm14140-201ENSMUST00000119999 995 ntBASIC17.71■□□□□ 0.43
Rp1l1Q8CGM2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rp1l1Q8CGM2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rp1l1Q8CGM2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rp1l1Q8CGM2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rp1l1Q8CGM2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rp1l1Q8CGM2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rp1l1Q8CGM2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rp1l1Q8CGM2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rp1l1Q8CGM2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rp1l1Q8CGM2 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.7■□□□□ 0.42
Rp1l1Q8CGM2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.7■□□□□ 0.42
Rp1l1Q8CGM2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rp1l1Q8CGM2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rp1l1Q8CGM2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rp1l1Q8CGM2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Rp1l1Q8CGM2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rp1l1Q8CGM2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rp1l1Q8CGM2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rp1l1Q8CGM2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rp1l1Q8CGM2 Gm15173-201ENSMUST00000122049 433 ntBASIC17.69■□□□□ 0.42
Rp1l1Q8CGM2 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.69■□□□□ 0.42
Rp1l1Q8CGM2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.69■□□□□ 0.42
Rp1l1Q8CGM2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.69■□□□□ 0.42
Rp1l1Q8CGM2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.69■□□□□ 0.42
Rp1l1Q8CGM2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rp1l1Q8CGM2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rp1l1Q8CGM2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rp1l1Q8CGM2 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rp1l1Q8CGM2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rp1l1Q8CGM2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rp1l1Q8CGM2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rp1l1Q8CGM2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rp1l1Q8CGM2 Gm25745-201ENSMUST00000174945 133 ntBASIC17.69■□□□□ 0.42
Rp1l1Q8CGM2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.69■□□□□ 0.42
Rp1l1Q8CGM2 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.69■□□□□ 0.42
Rp1l1Q8CGM2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rp1l1Q8CGM2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rp1l1Q8CGM2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rp1l1Q8CGM2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rp1l1Q8CGM2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rp1l1Q8CGM2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1l1Q8CGM2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1l1Q8CGM2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1l1Q8CGM2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1l1Q8CGM2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1l1Q8CGM2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1l1Q8CGM2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1l1Q8CGM2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rp1l1Q8CGM2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rp1l1Q8CGM2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1l1Q8CGM2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1l1Q8CGM2 Gm14822-201ENSMUST00000122247 291 ntBASIC17.68■□□□□ 0.42
Rp1l1Q8CGM2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms